Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq88 123 3e-23 seq73 91.5 2e-13 >seq88 Length=4649774 Score = 123 bits (136), Expect = 3e-23 Identities = 429/661 (65%), Gaps = 14/661 (2%) Strand=Plus/Minus Query 110375 CCAAG-TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTA 110433 ||||| ||||| || |||||||| ||| || ||||| ||||||||| | ||| | Sbjct 2235111 CCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAACGGGTTG 2235052 Query 110434 CCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGC 110492 || ||||| ||| | | |||||| || | ||| | | | ||| |||||| || Sbjct 2235051 CCGGTTTCGACCTGGGCTTCGAGAATCGCGTACCAAAGCTTTTGCG-CGGGGATCGTCTT 2234993 Query 110493 GTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACAC 110552 || ||| | || |||| ||||| || | ||| | | || || | || || || Sbjct 2234992 CTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCGCCATAGAC 2234933 Query 110553 ATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAAC 110612 || || || || | | |||| |||||||||| ||| | || | |||| || Sbjct 2234932 TTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGAC 2234873 Query 110613 CCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTC 110672 | || ||| || || || |||||||| | ||| |||| || ||||| || | || Sbjct 2234872 ACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTC 2234813 Query 110673 TTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTC 110732 || | || ||||| ||| || |||| || || | || || | |||||| ||||| Sbjct 2234812 CTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGTTC 2234753 Query 110733 GAGATAGACAGCGATGGATCCCTTACGACGAC-----CCGCCT-GGTTAACATAGCGTGC 110786 ||| |||| |||| || ||| | |||| || ||| ||| || ||||| || Sbjct 2234752 GAGGTAGATCGCGAAGGCTCC---AGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGC 2234696 Query 110787 TGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCT 110846 ||| ||| |||| | |||||| || | || || | || | || || ||||| Sbjct 2234695 GGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTACCGGC 2234636 Query 110847 AATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTT 110906 || ||| | || || |||| || || || ||| ||||| || || ||| Sbjct 2234635 GATGTAGGAGCCGGTCGCGCGGATGTTATGAATGCTCAAACCGATACCGCCGGCGGTCTT 2234576 Query 110907 ACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGT 110965 ||| | |||||| ||| |||| || | || || || ||||||||||| |||| Sbjct 2234575 GGAAATGAGCGCACACGTCT-TGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCA 2234517 Query 110966 TGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAG 111025 | | | || || || || || | ||| || |||||||||| || |||||||| || | Sbjct 2234516 TCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCG 2234457 Query 111026 G 111026 | Sbjct 2234456 G 2234456 >seq73 Length=1807266 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 119364 GAATTCATACCTATGAGATTACACGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTC 119422 ||||||||||| || || |||||| ||||| ||| | ||| | ||| ||||| || Sbjct 1386647 GAATTCATACCAATCAGCGC-CACGGGCAGAGCCTCGGTCAAGAACTCCTTTTCGATATC 1386589 Query 119423 CACAGCTTCTTTCACGATGGAGTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTT 119482 || || || ||||| || ||| | | || |||| | || |||| | | Sbjct 1386588 GACCGCCTCCTTCACAATCTGGTGCACCAATCCTTGACCTGGTCTCTTGTTCAAATGGCT 1386529 Query 119483 AAACAACTCTACGGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACT 119542 ||||| ||||| ||||| |||||| ||||| || || || |||||||| || Sbjct 1386528 GAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGAAATGAGCTCGTTGGA 1386469 Query 119543 GAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGG 119589 ||| | || ||||||||||| |||| ||| || ||||||||||||| Sbjct 1386468 GAAAGAGAGGCCAGGCATGAGCCCTCGTTTTTTGAGCCAAAAGATGG 1386422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974851496800