Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq84 158 1e-33 >seq84 Length=1022938 Score = 158 bits (174), Expect = 1e-33 Identities = 198/272 (73%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30173 || |||||| |||||| |||| || || || | | | | |||||||| || || Sbjct 243102 CAACTGATCGACCCCCTCCCCCTGATAATCATCCTTGGCGGTCCTATACTCTGCGCCAAA 243161 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 ||| |||||||| ||||| || |||||||||| |||||||||||||| || | || || Sbjct 243162 ATGTCTCCACTGAAACCCATAAACCGGTCCCAAATCTCCCTCTTCCCTATGTCCCAACCC 243221 Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30293 |||||||| ||| | ||| || || || | ||||| ||||| |||||||| ||||| Sbjct 243222 AACCTTGTCCAGAAATTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTGTCGGA 243281 Query 30294 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30353 | |||||| | || ||||||| |||||||| || || ||||| | || | Sbjct 243282 TAATAATTTGGAATCGGTCGACCCTCGAACGAACCAAAGGAGTTCCTCGATGATACCTCG 243341 Query 30354 CCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385 | ||||||| |||||||||| | ||||||| Sbjct 243342 CGTAAAGACCTTCTTGGTCGTCAAAAGGGGAA 243373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616823115788