Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq88 152 1e-31 >seq88 Length=4649774 Score = 152 bits (168), Expect = 1e-31 Identities = 784/1236 (63%), Gaps = 42/1236 (3%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | || |||| ||||||||| || || || | | ||||| Sbjct 2235486 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTG 2235427 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAG 213310 ||||| ||||| || || ||| |||||| || ||| || ||| | || || || Sbjct 2235426 AGCTTGCGCGCCTCGGGCGAATCGAACGGCATCGCCAATGCCATG-AACGCGTCGGCGAG 2235368 Query 213311 CCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCA 213369 ||| || || |||||||||||||| | ||| | | ||| || | | || ||| | Sbjct 2235367 CCCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTACTGCGC-CTCGATGA 2235309 Query 213370 AGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACAT 213429 ||| || ||||| ||||||||| ||| | |||| | | | || ||| ||| | Sbjct 2235308 CGGGATAGTAGTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCT 2235249 Query 213430 GGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCG 213488 | || | || | | | ||||| |||| || | ||| ||| |||| ||| Sbjct 2235248 CGTGCAACTTCTTGAAGTCGCACACG------CCGTTCTTGATAAAGCTC-GGCAACGCG 2235196 Query 213489 ATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTG 213548 || ||||| ||||| ||||| ||| | | | | |||||| |||||||||||| Sbjct 2235195 ATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCGGTG 2235136 Query 213549 CACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA 213608 |||||||| | | ||| ||||| ||||||| ||||| || || ||| || | Sbjct 2235135 CACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCG 2235076 Query 213609 TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAG 213668 ||||||||||||||| | ||| ||||| || | ||||| | || ||| | ||| Sbjct 2235075 TCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGTACCAA 2235016 Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCG 213725 || | || || | | | || | ||| | | || ||||| | ||| Sbjct 2235015 AGCTTTTGCGCGGGGATCGTCTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCG 2234962 Query 213726 TAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGA 213782 | || || ||| || | ||| |||| || || || || || | ||||| Sbjct 2234961 AACAGGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGG---GGCTTCGGCGGGG 2234905 Query 213783 CACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCAC 213842 || | |||| ||| || ||| | | ||| | || ||| || || ||||| | ||| Sbjct 2234904 CAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAG 2234845 Query 213843 AGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCT 213902 ||||| ||| || || | | | || ||| || ||| ||||| || || Sbjct 2234844 AGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCC 2234785 Query 213903 AGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GC 213959 || || || |||| ||| ||||||||||| || | |||||| || ||||| || | || Sbjct 2234784 AGGAACTCGAAGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGC 2234725 Query 213960 CTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACC 214019 | ||||| || ||||| || | || ||||| ||| || || | ||| || Sbjct 2234724 TTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACG 2234665 Query 214020 AGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTC 214079 | ||||| || | ||||| || || || || || ||||||| || | | ||| Sbjct 2234664 ATGCCGTTCGAGTAGCCGTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTTATGA 2234605 Query 214080 ATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139 ||| | || || || |||||| |||||| || | || || | | | || || Sbjct 2234604 ATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTCG 2234545 Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGC 214199 |||||| | || || || | | | | || ||| ||| ||| ||||| || Sbjct 2234544 TAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGG 2234485 Query 214200 CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTG---TTAGAG 214256 | || || | |||||| ||||| || ||| ||| |||| | | | || Sbjct 2234484 TGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGG---GTAAAGTAGCGCTCGGAC 2234428 Query 214257 AGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC 214316 | ||| |||| | || || ||| ||||||||| |||||| | ||| Sbjct 2234427 ATGAGGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACG 2234368 Query 214317 CTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAG 214373 | ||| ||||||||||| || | || || | ||| | | || |||| |||| Sbjct 2234367 CGCATGAGCATGTGCTGCGGTCGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAG 2234311 Query 214374 GAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAG 214409 |||||||| || || ||||| ||||||||| |||| Sbjct 2234310 GAGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAG 2234275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530983511040