Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq88 215 1e-50 seq73 102 2e-16 seq84 98.7 2e-15 >seq88 Length=4649774 Score = 215 bits (238), Expect = 1e-50 Identities = 803/1245 (64%), Gaps = 39/1245 (3%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479 || ||||||||||||||||| ||||| ||||||||| |||| |||||||| ||| Sbjct 2235462 GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAG---CTTGCGCGCCTCGGGCGAA 2235406 Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||| ||||| || | |||| | ||||||| || || || |||||||| ||||| Sbjct 2235405 TCGAACGGCATCGCCAATGCCATGAACG-CGTCGGCGAGCCCTTGCACTCCGATGCCGAT 2235347 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598 ||| | ||| | |||||| ||| || |||||||| ||||||||||||| Sbjct 2235346 GGGGCGGTGGCGGAAGTTGGAGTACTGCGCCTCGATGACGGGATAGTAGTTGACGTCGAT 2235287 Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAA 221658 | ||| | ||| | || || ||| || || |||||| || |||| ||||| Sbjct 2235286 GATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTC------TTGAA 2235233 Query 221659 CACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAG 221718 | || ||||| || || | || | || ||| | || ||||| Sbjct 2235232 GTCGCACACGCCG--TTCTTGATAAAGCTCGGC-AACGCG--------ATCG-AGGCCAA 2235185 Query 221719 GTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCT 221778 || || ||||| ||| || | |||| |||||||| || || ||||| Sbjct 2235184 ATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCGGTGCACAGGTTCGA 2235125 Query 221779 GCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAG 221838 | ||||||| || || |||| || || || || || || || |||||||||||||| Sbjct 2235124 GGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAG 2235065 Query 221839 CATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGC 221898 ||| || || ||| || || | ||| || | |||||| || ||| || | | || Sbjct 2235064 CATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGTACCAAAGCTTTTGCGC 2235005 Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTC--ATACCCGGTATAGAGCATGTCA 221956 | | |||| ||||| | ||||| |||||| || | | | || || | Sbjct 2235004 GGGGATCGTCTTCTTGGCGCGGCCCTC---CTTTTCGTATTTCTCGAACAGGGC--GCGG 2234950 Query 221957 AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAG 222016 |||| ||| || || | |||| ||||| || |||||| || | || ||| Sbjct 2234949 AACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAC 2234890 Query 222017 TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGA 222076 | | | | | ||| | || ||| ||||| ||||| ||||| ||||| |||||| Sbjct 2234889 TCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGA 2234830 Query 222077 TCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATG 222136 || | | || |||||| ||||| ||| || | || |||| ||||| || | | Sbjct 2234829 TCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACG 2234770 Query 222137 TCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGA 222196 |||||||||||||| || || |||| || | || || || |||||||||||||| || Sbjct 2234769 TCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCTTGTTGCCACCTTGG 2234710 Query 222197 TCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256 || || | | | |||| ||| || || | || || | ||||| || Sbjct 2234709 TCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAG 2234650 Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGAT 222315 ||||| || || ||||| | ||| || | | |||| || | || ||||| Sbjct 2234649 CCGTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTTA-TGAATGCTCAAACCGAT 2234591 Query 222316 ACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCAT 222375 ||| |||||| || || || | || || ||||||| ||||| |||||| || || Sbjct 2234590 ACCGCCGGCGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTCGTAGATGCCTTCAAT 2234531 Query 222376 AGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGC 222435 || || ||||| | | | ||| ||||| ||||| | ||| | | | | | ||| Sbjct 2234530 CGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGC 2234471 Query 222436 GTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTC 222495 ||| || ||||| || |||||| |||||||||| | ||||| || | ||||| || Sbjct 2234470 GTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTG 2234411 Query 222496 TACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTG 222555 | ||| | |||||| || ||||| || | |||| | |||| ||||| ||| Sbjct 2234410 CAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTG 2234351 Query 222556 GGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTG 222613 || | || | |||| | | | || |||| ||| || || || || ||| Sbjct 2234350 CGGTCGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTG 2234293 Query 222614 AACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658 || |||||||||||| | |||| || | | ||| | |||||| Sbjct 2234292 AAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCGTAGATAACGGCG 2234248 >seq73 Length=1807266 Score = 102 bits (112), Expect = 2e-16 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||| |||||||| | |||||| || ||| ||||||||||||| ||||| Sbjct 1385708 ATTTGGGCCATGTACAAACAAGCTCAAGCGTCGTTTTGGTCCGCCGAAGAGATCGATCTC 1385767 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | ||| ||| | ||| |||| || |||| | ||| ||||| | | ||| | Sbjct 1385768 GGCAACGACCTCCACGACTGGCACCACAAGCTCAA--CAACGACGAACGCTACTTTATTG 1385825 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||||| | || ||||| || || || ||||| | ||||||||||||||| ||||| Sbjct 1385826 CCCACGTGCTCGCCTTCTTCGCCGCTTCGGATGGGGTCGTGAACGAGAATCTGGTCGAGA 1385885 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | ||| | || || ||||||| || || || | ||| || || || || ||||| Sbjct 1385886 GGTTCTCAAGTGAGGTGCAGTTCGCCGAAGCGAGGTGCTTTTATGGCTTTCAGAT 1385940 >seq84 Length=1022938 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT 25980 || |||||||| ||||||||||||||||| || || |||||||| || ||| Sbjct 125909 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 125968 Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||||||||||||||| | |||||||| ||||||| || ||||| ||||| | | | Sbjct 125969 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTTTTGTTC 126028 Query 26041 ACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCT 26100 | |||| | | | |||| | ||| |||||| |||||||| ||||| Sbjct 126029 TC---CCACCTCGAGCGAAGACCTCACCCAGATACCGTCGCGCTCATCATCAAGGAGGCC 126085 Query 26101 GTGGAGATCGAGAAGGAGTT 26120 || || ||||||||||| || Sbjct 126086 GTCGAAATCGAGAAGGAATT 126105 Score = 91.5 bits (100), Expect = 3e-13 Identities = 155/224 (69%), Gaps = 7/224 (3%) Strand=Plus/Plus Query 25488 GTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACAT 25547 |||||||||||| | || |||||||||||||||||| || || |||||||||| Sbjct 125195 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 125254 Query 25548 GGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTG 25602 | ||| |||| || |||| | || ||||||| | || || | |||| | Sbjct 125255 GCACGACTGGGACAACAAGCTCAAGCC--CGACGAGCGCTACTTCATCTCGCACGTCCTC 125312 Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662 || || || || ||||| || || || || |||||||| || |||| ||||| | | Sbjct 125313 GCCTTTTTCGCCGCCTCCGACGGGATTGTCAACGAGAACTTGGTCGAGCGATTCTCTGGT 125372 Query 25663 GAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 || || |||| || ||||| || || || |||||||| || Sbjct 125373 GAGGTCCAGTCCGCCGAGGCTCGATGCTTTTATGGTTTCCAAAT 125416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842988752640