Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq102 113 6e-20 >seq102 Length=717467 Score = 113 bits (124), Expect = 6e-20 Identities = 245/367 (67%), Gaps = 0/367 (0%) Strand=Plus/Minus Query 47800 ACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTG 47859 ||||| || || || ||||| || ||||| | ||||||| |||| || || || | Sbjct 83935 ACAAAGTCGTCGGGGGTGTCTTGCTGCAGCATCATCCACATACCCTCCACGTAGTCGCGT 83876 Query 47860 GCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCT 47919 || |||||||||||||| || || | || || || || | ||||| || | ||| Sbjct 83875 GCGTGTCCCCAGTCACGCTTGGCCTCCAAGTTGCCGAGGTAGAGGCAGTCCTGTTGACCG 83816 Query 47920 TCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTT 47979 ||||| | | |||| | || || | || || || || |||||| | Sbjct 83815 AGCGAGATCTCGGCGACAGCTCGCGAGATTTTCCTCGTGACGAAGGTGCGACCACGACGC 83756 Query 47980 GGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAG 48039 || || || || || || | ||||| | || || ||||| |||| || || || ||| Sbjct 83755 GGGGACTCGTGGTTGAACAAGATACCGTTGCACGCGTACATGTCGTACGACTCGCGGTAG 83696 Query 48040 TTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAA 48099 ||||| || |||||| | | || | || ||||| || ||||| ||||| || ||||| Sbjct 83695 TTCTTGACGATCCAGAAGGCGTACAACTTGGCAACGCCGTAAGGCGAACGAGGGTAGAAG 83636 Query 48100 GGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCT 48159 || || ||||| | || || ||||| ||||| || || | || ||| || ||| Sbjct 83635 GGCGTCGTCTCGGATTGAGGGGTCTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCT 83576 Query 48160 TGATAGA 48166 || |||| Sbjct 83575 TGGTAGA 83569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493102285920