Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq88 168 8e-37 seq84 114 2e-20 seq102 113 5e-20 >seq88 Length=4649774 Score = 168 bits (186), Expect = 8e-37 Identities = 595/923 (64%), Gaps = 15/923 (2%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| ||||||| || ||| ||| | | || |||| |||| || Sbjct 2234282 TACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAGGTCGCC 2234341 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 ||| || ||| ||||| ||||||| ||||| ||||||||||||| | ||||| || Sbjct 2234342 GAACGACCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAG 2234401 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 75325 |||||| || | ||| || |||||| | | || | ||||| | || || Sbjct 2234402 CGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACG 2234461 Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 |||||||| || || || || |||||| | || || ||||| || | | ||| Sbjct 2234462 CTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAG 2234521 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 || || || || | || ||||| | || || | | |||||||| || || ||| Sbjct 2234522 GACGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGTGCGCTCATTTCCAAGACC 2234581 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGG 75504 || || ||||| || || ||| ||| | | | || | ||| || ||| | Sbjct 2234582 GCCGGCGGTATCGGTTTGAGCATTCATAACATCCGCGCGACCGG--CTCCTACATCGCCG 2234639 Query 75505 G-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563 | || || || | || | || || | || ||||| || || | ||| ||| |||| Sbjct 2234640 GTACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGC 2234699 Query 75564 GCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617 |||| || | |||| || ||||| || || ||||| ||||| | |||| Sbjct 2234700 GCTACGTCGACCAAGGTGGCAACAAGCGTCCT---GGAGCCTTCGCGATCTACCTCGAAC 2234756 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 | ||||| || || || | |||||||| || | || ||||| || | || || | Sbjct 2234757 CGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAG 2234816 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || | | |||||||| | | || |||||||| || || || ||| |||| || | Sbjct 2234817 TCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCGTGTCG 2234876 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 ||| | || | ||| | || ||||| || | | | || || || ||| ||| | Sbjct 2234877 AGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCT 2234936 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 || || ||||| ||||| | | || || ||| ||||||| | ||||| || Sbjct 2234937 ATGGCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGA 2234996 Query 75858 CTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | || || || | | ||||| | || |||||| || | ||| || || || | Sbjct 2234997 CGATCCCCGC-GCAAAAGCTTTGGTACGCGATTCTCGAAGCCCAGGTCGAAACCGGCAAC 2235055 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||| |||||||| || |||||||| ||||||||||| | || || Sbjct 2235056 CCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACG 2235115 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 |||||| ||| || || ||||| || || | |||||| | | |||||| || Sbjct 2235116 ATCAAGTCCTCGAACCTGTGCACCGAGATCATTGAGTACTCGGCGCCCGATGAGTGCGCC 2235175 Query 76037 GTTTGCAATTTGGCATCAATCGC 76059 || ||||||||||| || ||||| Sbjct 2235176 GTCTGCAATTTGGCCTCGATCGC 2235198 >seq84 Length=1022938 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||| ||| | || || | || || ||||||||||||||||| ||| Sbjct 295524 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 295583 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| |||| Sbjct 295584 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAT 295643 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 295644 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGAGTCGTCTCGGACTGAGGGGTCTCG 295703 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTa 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 295704 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 295741 >seq102 Length=717467 Score = 113 bits (124), Expect = 5e-20 Identities = 269/407 (66%), Gaps = 0/407 (0%) Strand=Plus/Minus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 || ||||||| | | || | ||| || || |||||||||| ||| | || || | Sbjct 83977 TCGACAAACTCCTTGACGGGGTGGGTTTCGCCCGTCGCGAGGACAAAGTCGTCGGGGGTG 83918 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| | |||||| | || || ||||| || || |||||||| | Sbjct 83917 TCTTGCTGCAGCATCATCCACATACCCTCCACGTAGTCGCGTGCGTGTCCCCAGTCACGC 83858 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 || | | ||| ||||| | ||| | || | ||| | || | ||| Sbjct 83857 TTGGCCTCCAAGTTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 83798 Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798 | | || ||| | ||||| ||| | ||| || | ||| || ||||||||||| Sbjct 83797 GCTCGCGAGATTTTCCTCGTGACGAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAAC 83738 Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858 | ||| ||| ||| || ||||| | || || || ||||| || ||||||| |||| Sbjct 83737 AAGATACCGTTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAG 83678 Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918 ||| ||| |||| ||||| || || || ||||||||||| ||| ||| | ||| Sbjct 83677 GCGTACAACTTGGCAACGCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGA 83618 Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTa 177965 || || || ||| || || ||| ||| || || ||||||||||| Sbjct 83617 GGGGTCTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTA 83571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568436689280