Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq88 168 8e-37
seq84 114 2e-20
seq102 113 5e-20
>seq88
Length=4649774
Score = 168 bits (186), Expect = 8e-37
Identities = 595/923 (64%), Gaps = 15/923 (2%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205
|||||||| ||||||| || ||| ||| | | || |||| |||| ||
Sbjct 2234282 TACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAGGTCGCC 2234341
Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265
||| || ||| ||||| ||||||| ||||| ||||||||||||| | ||||| ||
Sbjct 2234342 GAACGACCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAG 2234401
Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 75325
|||||| || | ||| || |||||| | | || | ||||| | || ||
Sbjct 2234402 CGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACG 2234461
Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385
|||||||| || || || || |||||| | || || ||||| || | | |||
Sbjct 2234462 CTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAG 2234521
Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445
|| || || || | || ||||| | || || | | |||||||| || || |||
Sbjct 2234522 GACGATTCGATTGAAGGCATCTACGACACGCTCAAGACGTGTGCGCTCATTTCCAAGACC 2234581
Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGG 75504
|| || ||||| || || ||| ||| | | | || | ||| || ||| |
Sbjct 2234582 GCCGGCGGTATCGGTTTGAGCATTCATAACATCCGCGCGACCGG--CTCCTACATCGCCG 2234639
Query 75505 G-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563
| || || || | || | || || | || ||||| || || | ||| ||| ||||
Sbjct 2234640 GTACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGC 2234699
Query 75564 GCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617
|||| || | |||| || ||||| || || ||||| ||||| | ||||
Sbjct 2234700 GCTACGTCGACCAAGGTGGCAACAAGCGTCCT---GGAGCCTTCGCGATCTACCTCGAAC 2234756
Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677
| ||||| || || || | |||||||| || | || ||||| || | || || |
Sbjct 2234757 CGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAG 2234816
Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737
|| | | |||||||| | | || |||||||| || || || ||| |||| || |
Sbjct 2234817 TCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCGTGTCG 2234876
Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797
||| | || | ||| | || ||||| || | | | || || || ||| ||| |
Sbjct 2234877 AGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCT 2234936
Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857
|| || ||||| ||||| | | || || ||| ||||||| | ||||| ||
Sbjct 2234937 ATGGCGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGA 2234996
Query 75858 CTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916
| | || || || | | ||||| | || |||||| || | ||| || || || |
Sbjct 2234997 CGATCCCCGC-GCAAAAGCTTTGGTACGCGATTCTCGAAGCCCAGGTCGAAACCGGCAAC 2235055
Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976
|| | ||||| |||||||| || |||||||| ||||||||||| | || ||
Sbjct 2235056 CCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACG 2235115
Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036
|||||| ||| || || ||||| || || | |||||| | | |||||| ||
Sbjct 2235116 ATCAAGTCCTCGAACCTGTGCACCGAGATCATTGAGTACTCGGCGCCCGATGAGTGCGCC 2235175
Query 76037 GTTTGCAATTTGGCATCAATCGC 76059
|| ||||||||||| || |||||
Sbjct 2235176 GTCTGCAATTTGGCCTCGATCGC 2235198
>seq84
Length=1022938
Score = 114 bits (126), Expect = 2e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807
||||| | ||||| ||| | || || | || || ||||||||||||||||| |||
Sbjct 295524 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 295583
Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867
||| || ||||| | || || || ||||| || ||||||| |||| ||| ||||
Sbjct 295584 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAT 295643
Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927
|||| ||| || ||| || || ||||||||||| ||| ||| | || || || ||
Sbjct 295644 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGAGTCGTCTCGGACTGAGGGGTCTCG 295703
Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTa 177965
||| || || ||| |||||| || ||||| |||||
Sbjct 295704 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 295741
>seq102
Length=717467
Score = 113 bits (124), Expect = 5e-20
Identities = 269/407 (66%), Gaps = 0/407 (0%)
Strand=Plus/Minus
Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618
|| ||||||| | | || | ||| || || |||||||||| ||| | || || |
Sbjct 83977 TCGACAAACTCCTTGACGGGGTGGGTTTCGCCCGTCGCGAGGACAAAGTCGTCGGGGGTG 83918
Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678
||||| || ||||| | |||||| | || || ||||| || || |||||||| |
Sbjct 83917 TCTTGCTGCAGCATCATCCACATACCCTCCACGTAGTCGCGTGCGTGTCCCCAGTCACGC 83858
Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738
|| | | ||| ||||| | ||| | || | ||| | || | |||
Sbjct 83857 TTGGCCTCCAAGTTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 83798
Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798
| | || ||| | ||||| ||| | ||| || | ||| || |||||||||||
Sbjct 83797 GCTCGCGAGATTTTCCTCGTGACGAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAAC 83738
Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858
| ||| ||| ||| || ||||| | || || || ||||| || ||||||| ||||
Sbjct 83737 AAGATACCGTTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAG 83678
Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918
||| ||| |||| ||||| || || || ||||||||||| ||| ||| | |||
Sbjct 83677 GCGTACAACTTGGCAACGCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGA 83618
Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTa 177965
|| || || ||| || || ||| ||| || || |||||||||||
Sbjct 83617 GGGGTCTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTA 83571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568436689280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |