Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq61 87.8 5e-12
>seq61
Length=3738257
Score = 87.8 bits (96), Expect = 5e-12
Identities = 124/170 (73%), Gaps = 12/170 (7%)
Strand=Plus/Plus
Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547
||||| || ||||| |||||||| |||||||| |||||||||||||||||||| || |
Sbjct 1100255 CCGTGAGAGATCATGCAATCACGTTCCATTTCTCCGAAACGAAGACCACCATCTCGCGAT 1100314
Query 251548 CTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGGCTA 251601
| ||||| | || || || || |||| | | | |||||| | | ||| | |
Sbjct 1100315 CGGCCCTCCACGGGTTGTCGGGTCAAGATCTGA--AGAGGACCGCGAGCTCGAGAGTGAA 1100372
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651
| ||| || || ||||| ||||||||||| |||||| ||| |||||
Sbjct 1100373 TTTTG----TCGTTGACCATGTGCTTGAGACGTTGGTAGTATGTTGGACC 1100418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814658204572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |