Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq88 129 5e-25 seq73 123 2e-23 seq61 114 1e-20 >seq88 Length=4649774 Score = 129 bits (142), Expect = 5e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| ||||| | || || || || || || || || || ||||| || || | |||| Sbjct 184611 GCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 184670 Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 ||| | || |||| ||||| || |||||||||||| ||||| || || || || || | Sbjct 184671 CACGATCGACAACGTCAAAACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 184729 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||||||||| || ||||| |||||| | | | || | || || |||| Sbjct 184730 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 184789 Query 24885 TTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||||| ||||| || |||||||| Sbjct 184790 TTCAAAAGGAGTCGACCCTCCACTTGGT 184817 >seq73 Length=1807266 Score = 123 bits (136), Expect = 2e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| |||||| | || || || || || || || || || ||||| || || | ||| Sbjct 312934 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 312993 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 | || | || | || || |||||||| ||||| |||||||| || || || || | Sbjct 312994 ATACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAGC 313053 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||||||||| || ||||| |||||| | | | || | || || |||| Sbjct 313054 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 313113 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | |||||||| ||||| || ||||||||| | || |||| || || Sbjct 313114 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 313159 >seq61 Length=3738257 Score = 114 bits (126), Expect = 1e-20 Identities = 154/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || ||||| || || || || || |||||||| || || | | Sbjct 871842 GATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTC 871901 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || || ||||| |||||||| || || || || ||||| | Sbjct 871902 GGACACGATTGACAACGTCAAGAC-CAAGATTCAAGACAAGGAGGGTATCCCCCCCGACC 871960 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || || |||||||| || || || ||||| ||||| | | | | ||||| | Sbjct 871961 AGCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACA 872020 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||| || ||||| ||||| || ||||||||| Sbjct 872021 ACATCCAGAAGGAGTCGACGCTGCACTTGGTG 872052 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || ||||||||||| || ||| || | Sbjct 597221 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597280 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 597281 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 597340 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || ||||| ||||| | | | | ||||| ||| Sbjct 597341 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 597400 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 597401 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 597430 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || ||||||||||| || ||| || | Sbjct 597677 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597736 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 597737 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 597796 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || ||||| ||||| | | | | ||||| ||| Sbjct 597797 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 597856 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 597857 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 597886 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || ||||| || || ||||||||||| || ||| || | Sbjct 596993 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 597052 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| || || ||||| || || || || ||||| || Sbjct 597053 GATACGATCGACAACGTCAAGGCCAAA-ATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597111 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||| || || || ||||| ||||| | | | | ||||| || Sbjct 597112 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597171 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || ||||| ||||| || ||||||||| Sbjct 597172 CATCCAGAAGGAGTCGACGCTGCACTTGGTG 597202 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || ||||| || || ||||||||||| || ||| || | Sbjct 872071 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 872130 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| || || || || || || ||||| || Sbjct 872131 GATACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCAG 872190 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| ||||| | | | | || || || Sbjct 872191 CAGCGATTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTACAAT 872250 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 872251 ATCCAGAAGGAGTCGACGCTCCACTTGGTG 872280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896722699680