Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq77 114 1e-20
seq61 91.5 1e-13
seq88 82.4 6e-11
>seq77
Length=1773113
Score = 114 bits (126), Expect = 1e-20
Identities = 278/408 (68%), Gaps = 15/408 (4%)
Strand=Plus/Plus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261
|| ||||| || || ||||||| |||| || || | | | ||| | ||| |||| | |
Sbjct 1122380 GGGGGGTTCTTAAGGATGAAGGCCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 1122437
Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319
|||||||| |||||| | || || ||| ||| | || | | | |||||||||
Sbjct 1122438 TGCCGCATGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTG--GTAATGATGAGCTC 1122492
Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379
|| || ||||| | || || || | ||| |||||| |||||| | || ||||
Sbjct 1122493 CGTTTCGGGGTTCTTGCACGACGCGCATAGCACGAACTTGTCGATGAAGACGTCGAGCAA 1122552
Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439
||| | | | | ||||| | ||||||||||||| | |||||| | | | |
Sbjct 1122553 GTCACGCAGACGATTCGTCTCGTGCGCGCCGTTGACGATGTAGCGTTCGGTCTCATCGTT 1122612
Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499
|| || || ||||| || |||||||| ||| | || |||||||| | ||| ||
Sbjct 1122613 GAAGGTCGCCTGGGCGCCGAGTTCGCACCCAAAGAATTTCGTCGGGTACGACGACGGGCG 1122672
Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558
| |||| || || | || | ||||||| | |||||||||||||||||||||
Sbjct 1122673 ATTCAAG-GCTCGCGCAACATCAGCCATGTTGGGAAAGACAGTCTTGATGCCGTTGCCGC 1122731
Query 34559 TTCCTTCGACCTTGGCGCAGA-TGCGCGGCATTTTGTAGCGGTAGAAC 34605
|| |||| ||||| ||| || | ||||| |||||||||||||||
Sbjct 1122732 GGCCCTCGATCTTGGTCAAGAGTGAG-GGCATCTTGTAGCGGTAGAAC 1122778
>seq61
Length=3738257
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331
|||||||| || ||||| || | |||||||| || ||||| |||| || | ||| |
Sbjct 597677 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597736
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | | || || |||||| ||||| || ||| | ||| || ||
Sbjct 597737 -GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597795
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || | || | ||||| || ||||| ||||| | | | || | || ||||||||
Sbjct 597796 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597855
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500
||| || || || || ||| ||||| ||||| | | || |||||||||
Sbjct 597856 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGGGGA 597904
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331
|||||||| |||||||| || || |||||||| || || || |||| || | |||
Sbjct 597449 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCG 597508
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||||| ||| | | || || |||||| ||||| || ||| | ||| || ||
Sbjct 597509 -GATACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597567
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || | || | ||||| || ||||| ||||| | | | || | || ||||||||
Sbjct 597568 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597627
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||| || || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 597628 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGG 597675
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331
|||||||| |||||||| || | |||||||| || || || |||| || | |||
Sbjct 596765 ATGCAAATTTTTGTCAAGACCCTGACCGGCAAGACGATCACACTCGAGGTCGAATCCTCG 596824
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||||| ||| | | || || |||||| ||||| || ||| | ||| || ||
Sbjct 596825 -GATACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 596883
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || | || | ||||| || ||||| ||||| | | | || | || ||||||||
Sbjct 596884 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 596943
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||| || || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 596944 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGG 596991
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331
|||||||| |||||||| || | |||||||| || ||||| |||| || | |||
Sbjct 596993 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 597052
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||||| ||| | | || || || ||| ||||| || ||| | ||| || ||
Sbjct 597053 -GATACGATCGACAACGTCAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597111
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || | || | ||||| || ||||| ||||| | | | || | || ||||||||
Sbjct 597112 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597171
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||| || || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 597172 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGG 597219
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331
|||||||| || ||||| || | |||||||| || ||||| |||| || | ||| |
Sbjct 597221 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 597280
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || ||| | | || || |||||| ||||| || ||| | ||| || ||
Sbjct 597281 -GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCA 597339
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| || | || | ||||| || ||||| ||||| | | | || | || ||||||||
Sbjct 597340 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 597399
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||| || || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 597400 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGCCTCCGAGGTGG 597447
>seq88
Length=4649774
Score = 82.4 bits (90), Expect = 6e-11
Identities = 153/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 110275 GCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGA 110334
|||||| || ||||| || | || ||||| || || ||| |||| ||| | |||
Sbjct 184611 GCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 184670
Query 110335 TACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACA 110394
|| ||| | | || ||| ||||| ||||| |||||| | || || || ||
Sbjct 184671 CACGATCGACAACGTCAAAACCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 184730
Query 110395 AAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACAT 110454
| | || || | ||| || || ||||| ||||||| | | || |||| || ||||||||
Sbjct 184731 ACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACAT 184790
Query 110455 TCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| || || || | ||| |||| | | || ||||| ||
Sbjct 184791 TCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTCCGAGGTGG 184835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840815084908
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |