Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq88 183 5e-40
seq83 109 9e-18
seq84 107 3e-17
>seq88
Length=4649774
Score = 183 bits (202), Expect = 5e-40
Identities = 196/259 (76%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|||||||| |||||||| |||| ||| |||| ||||||||||| || | |||||| ||
Sbjct 2234712 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 2234653
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
| |||||| || || || | ||||| ||| | ||||| | || || | || |||
Sbjct 2234652 TAGCCGTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTTATGAATGCTCAAACCG 2234593
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| |||||||| | |||||| |||||||| ||| | || ||||| ||||||||||| ||
Sbjct 2234592 ATACCGCCGGCGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTCGTAGATGCCTTCA 2234533
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
||||| ||| ||||||| | ||| || || ||||| |||||| | | ||| |||
Sbjct 2234532 ATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCG 2234473
Query 2073781 GCATTGAAGAGCGTGGGCG 2073799
|| ||||||||||| ||||
Sbjct 2234472 GCGTTGAAGAGCGTCGGCG 2234454
Score = 145 bits (160), Expect = 1e-28
Identities = 298/449 (66%), Gaps = 0/449 (0%)
Strand=Plus/Minus
Query 2071564 GGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTC 2071623
|||| ||| ||| | || ||||||||||||||| | ||| | | ||||| ||||||
Sbjct 2235162 GGCGCCGAGTACTCAATGATCTCGGTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTC 2235103
Query 2071624 TGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCG 2071683
| ||||| || ||| |||||||||||| |||||| | || || || |||
Sbjct 2235102 TTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCG 2235043
Query 2071684 ATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGG 2071743
| ||| || || || || |||||| | ||||||| | || || | ||||||
Sbjct 2235042 ACCTGGGCTTCGAGAATCGCGTACCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCGCGG 2234983
Query 2071744 CCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGG 2071803
|||| | |||||| || | |||| | | ||||| |||
Sbjct 2234982 CCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGG 2234923
Query 2071804 CCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATA 2071863
||||| || |||| ||||| ||||| | ||| |||||| | | | | || || ||||
Sbjct 2234922 CCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATA 2234863
Query 2071864 AACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCG 2071923
|| || || |||| || | | |||||||| || || ||| ||||||||||||
Sbjct 2234862 AAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCG 2234803
Query 2071924 TGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAG 2071983
|||||||| ||||| || | |||| || ||| ||||||||||| || ||||||
Sbjct 2234802 TGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGTTCGAGGTAGATC 2234743
Query 2071984 GCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|| ||||| || |||||| ||| ||
Sbjct 2234742 GCGAAGGCTCCAGGACGCTTGTTGCCACC 2234714
Score = 98.7 bits (108), Expect = 2e-14
Identities = 142/196 (72%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCT 2070109
||| || |||||||| ||||| ||||| ||| |||||| ||||| ||| |
Sbjct 2235463 CGCGGCGTGGTAGATGGTCTCGAAGATT-TGCTTGTTGAGCTTGCGCGCCTCGGGCGAAT 2235405
Query 2070110 CCCACGGCAGGTCCATCATGGCA--AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCAT 2070167
| |||||| ||| ||| || ||||||||||| || || ||||| |||| ||| ||
Sbjct 2235404 CGAACGGCATCGCCA--ATGCCATGAACGCGTCGGCGAGCCCTTGCACTCCGATGCCGAT 2235347
Query 2070168 CGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227
|| |||||||| | ||| |||| | | |||||| || || |||| ||||| ||||||
Sbjct 2235346 GGGGCGGTGGCGGAAGTTGGAGTACTGCGCCTCGATGACGGGATAGTAGTTGACGTCGAT 2235287
Query 2070228 CACGCGGTTGAGGTTG 2070243
| |||||| | ||||
Sbjct 2235286 GATGCGGTTCAAGTTG 2235271
Score = 87.8 bits (96), Expect = 3e-11
Identities = 168/243 (69%), Gaps = 10/243 (4%)
Strand=Plus/Minus
Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310
||||||||||| |||| ||| || | | || | || || |||| |||||||||||
Sbjct 2236312 TGGTCGACGGTGAACTTGATCGCACCGACAGCGGCGCGCGTACGCAAGTAGTACATGCCC 2236253
Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGA-TGGACTCGGCATTCGG 2069369
||||| || || || ||| ||||| |||||||||||||| | | | | || ||
Sbjct 2236252 GTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTGCGCCATCGTTGGG 2236193
Query 2069370 GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGC 2069429
|| || ||| | ||| ||||| || |||||| | ||| | |||||||| |
Sbjct 2236192 CTCGACA-AGTGAATGTTTAGCGATTGCGACTGGTCAATGAAGGCACCTCGGTCGGCGGA 2236134
Query 2069430 CATGTCG---ATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485
|| |||| ||||| | ||| || | |||||| ||||||||| | | |||||||
Sbjct 2236133 CAAGTCGATAATGGT----CTTTTGCGAGATCTCCCAGACGGTCTTGTAGATTGCCTTGA 2236078
Query 2069486 GAT 2069488
|||
Sbjct 2236077 GAT 2236075
>seq83
Length=2022715
Score = 109 bits (120), Expect = 9e-18
Identities = 161/227 (71%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
|||| || || || |||| ||||||| ||| ||| || ||| | | ||||| || || |
Sbjct 697590 CCTTTGTGCCTTCCGAGATGGCGTGCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCG 697649
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601
|||||| |||||||| | |||||| ||| | |||| || ||| || |
Sbjct 697650 AGGTCTGAATCTCGCGCGATGAGATCGTCGACTTGTGGTTGTAGGT---CGCGAGCTTGG 697706
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
|||||| | ||| || |||| ||||||||||| |||||||| | ||| |||||
Sbjct 697707 ATGCCTCGAGGGAGATACGTTCGAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCG 697766
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| ||| |||||| || || ||||| | |||||||
Sbjct 697767 CCTTGTTCGAGATACCCGTGTCGGGATGGACTTGCTTCAACACCTTG 697813
Score = 104 bits (114), Expect = 4e-16
Identities = 160/227 (70%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
|||| ||||| || |||| ||||||| | | ||| || ||| | | ||||| || || |
Sbjct 1472995 CCTTTGTACCTTCCGAGATGGCGTGCTTTGACAGCTCTCCGGGGAGGATCAATCGGACCG 1473054
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601
|||||| ||||| || | |||||| ||| | |||| || ||| || |
Sbjct 1473055 AGGTCTGAATCTCACGCGATGAGATCGTCGACTTGTGGTTGTAGGT---CGCGAGCTTGG 1473111
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
|||||| | ||| || |||| ||||||||||| |||||||| | ||| |||||
Sbjct 1473112 ATGCCTCGAGGGAGATACGTTCGAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCG 1473171
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| ||| |||||| || || ||||| | |||||||
Sbjct 1473172 CCTTGTTCGAGATACCCGTGTCGGGATGGACTTGCTTCAACACCTTG 1473218
Score = 100 bits (110), Expect = 5e-15
Identities = 154/217 (71%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
||||||| || || |||| ||||||| ||| || ||| || | | ||||| ||| || |
Sbjct 366056 CCTTGGTGCCTTCCGAGATGGCGTGCTTGGACAATTCTCCAGGAAGGATCAAGCGAACCG 365997
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG---CGCCAGGCGGC 1485601
|||||| |||||||| | |||||| || |||||| || ||| || |
Sbjct 365996 AGGTCTGAATCTCGCGTGACGAGATCGTC--GC-CTTGTTGTTGTAGGTCGCGAGCTTGG 365940
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
|||||| | ||| || || | ||||||||||| |||||||| | ||| |||||
Sbjct 365939 ATGCCTCGAGGGAGATACGCTCAAAGATGTCGTTGACGAACGAGTTGAGGATGAGCATCG 365880
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1485698
||||| ||||| ||| ||||||||| || |||||
Sbjct 365879 CCTTGTTCGAGATACCCGTGTCGGGGTGGACTTGCTT 365843
>seq84
Length=1022938
Score = 107 bits (118), Expect = 3e-17
Identities = 145/199 (73%), Gaps = 5/199 (3%)
Strand=Plus/Minus
Query 796150 GCCTCGG-GTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208
||||||| | ||| ||||||| ||| || || ||| |||||| || || ||
Sbjct 125392 GCCTCGGCGGACT-GGACCTCACCAGAGAATCGCTCGACCAAGTTCTCGTTGACAATCCC 125334
Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268
|||| ||||||||||||||||||||||||| ||| |||| ||||||||| ||||
Sbjct 125333 GTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCGTCGGGCTTGAG 125274
Query 796269 C---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325
| | |||||| | | |||| | | ||| | ||| ||||||||||| |||||
Sbjct 125273 CTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTCCATCTCTTCGGCGGTCCAGAAGGA 125214
Query 796326 GGCCTCGGCCTTTTTGTAC 796344
||||||||||| ||||||
Sbjct 125213 TGCCTCGGCCTTCTTGTAC 125195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916229805568484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |