Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq88 123 2e-23
seq73 123 2e-23
seq61 107 1e-18
>seq88
Length=4649774
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| |||||| |||||||| ||||| | | | |||| ||||
Sbjct 184820 AGGACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCC 184761
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || |||||||||||| |||| | || ||||||||
Sbjct 184760 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 184701
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||||| | |||| || | |||||| || | ||| || |||
Sbjct 184700 TGGATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 184641
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| ||||| || ||||| || ||||| ||| ||
Sbjct 184640 TTGCCCGTAAGTGTCTTGACGAAGATTTGCCTG 184608
>seq73
Length=1807266
Score = 123 bits (136), Expect = 2e-23
Identities = 154/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| |||||| || ||||| ||||| | | | |||| ||||
Sbjct 313144 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 313085
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || |||||||||||| | || | || ||||||||
Sbjct 313084 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCC 313025
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | |||||| || | ||| ||||||
Sbjct 313024 TGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTGATGGTC 312965
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976
|| |||||||||||||| |||||||| ||||
Sbjct 312964 TTGCCCGTGAGGGTCTTGACAAAGATTTGCA 312934
>seq61
Length=3738257
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| | || || || ||||| || |||||
Sbjct 872034 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 871975
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904
||||| ||| |||||||| | || | ||||||||||| || | | || || ||||||
Sbjct 871974 GATCAATCGCTGCTGGTCGGGGGGGATACCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 871916
Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964
| |||| || | |||||| || | || || ||||| ||||| || ||||| |
Sbjct 871915 TGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGA 871856
Query 34965 CAAAGATCTGCAT 34977
|||||||||||||
Sbjct 871855 CAAAGATCTGCAT 871843
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| | || || || ||||| || |||||
Sbjct 597184 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 597125
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||| |||||||| | || | ||||||||||| | ||||| ||||||
Sbjct 597124 GATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATTTTGGCCTTGACGTT 597065
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || || ||||| || | || || ||||| || || |||||||| ||
Sbjct 597064 GTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGAC 597005
Query 34966 AAAGATCTGCAT 34977
|||||| |||||
Sbjct 597004 AAAGATTTGCAT 596993
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| | || || || ||||| || |||||
Sbjct 596956 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 596897
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||| |||||||| | || | ||||||||||| | || || ||||||
Sbjct 596896 GATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 596837
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || || ||||| || | || || ||||| || || |||||||| ||
Sbjct 596836 GTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTTGCCGGTCAGGGTCTTGAC 596777
Query 34966 AAAGATCTGCAT 34977
||| || |||||
Sbjct 596776 AAAAATTTGCAT 596765
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| | || || || ||||| || |||||
Sbjct 597412 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 597353
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||| |||||||| | || | ||||||||||| | || || ||||||
Sbjct 597352 GATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 597293
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || || ||||| || | || || ||||| || || |||||||| ||
Sbjct 597292 GTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGAC 597233
Query 34966 AAAGATCTGCAT 34977
||||| |||||
Sbjct 597232 GAAGATTTGCAT 597221
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| | || || || ||||| || |||||
Sbjct 597640 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 597581
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||| |||||||| | || | ||||||||||| | || || ||||||
Sbjct 597580 GATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 597521
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || || ||||| || | || || ||||| || || | |||||| ||
Sbjct 597520 GTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGAC 597461
Query 34966 AAAGATCTGCAT 34977
|||||| |||||
Sbjct 597460 AAAGATTTGCAT 597449
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || | || |||| | || || || ||||| || |||||
Sbjct 597868 CTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 597809
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||| |||||||| | || | ||||||||||| | || || ||||||
Sbjct 597808 GATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 597749
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || || ||||| || | || || ||||| || || |||||||| ||
Sbjct 597748 GTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGAC 597689
Query 34966 AAAGATCTGCAT 34977
||||| |||||
Sbjct 597688 GAAGATTTGCAT 597677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692180776564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |