Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq88 114 1e-20
seq73 89.7 5e-13
>seq88
Length=4649774
Score = 114 bits (126), Expect = 1e-20
Identities = 612/954 (64%), Gaps = 29/954 (3%)
Strand=Plus/Minus
Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGG-CGTCGCTGTACTGCACGATTTC 147518
||||| || |||| |||||||||||| ||| |||| || || ||||| | ||| ||
Sbjct 2235198 GCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGA-GTACTCAATGATCTC 2235140
Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCC-GATTGC 147577
|| ||||||||| | | || || || | || | || || |||| | ||||
Sbjct 2235139 GGTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGC 2235080
Query 147578 ACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA--- 147634
||||| ||| |||||||| |||| |||||| ||||| || | ||| | ||
Sbjct 2235079 G-GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGT 2235021
Query 147635 ACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCT 147694
||| | || | ||||| | | | || | ||||||||| |||||||| ||
Sbjct 2235020 ACCAAAGC---TTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCT 2234964
Query 147695 CGTACAACCGCTCA-AACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGA 147753
|| ||| || | ||||| ||||| ||| ||| |||||||| || ||||
Sbjct 2234963 CGAACAGG-GCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCGGCGGG 2234906
Query 147754 -CACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCA 147812
|| | || | |||| | || | || | || || |||||| |||||||| | |||
Sbjct 2234905 GCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCA 2234846
Query 147813 CAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATT 147872
||||| | | ||||| || || | ||||| ||| ||| | | || |
Sbjct 2234845 GAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTT-CTTGCGAAGGT 2234787
Query 147873 --AAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTA 147930
| | || | | ||| ||| |||||||| ||||| | ||||| || | || || |
Sbjct 2234786 CCAGGAACTCGA-AGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGA 2234728
Query 147931 CGCTTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGT 147987
||||| || || |||||||| | |||| | ||||||| | || || | ||||||
Sbjct 2234727 CGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGG 2234668
Query 147988 TCCAGGCCGCTCGCAGT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTC 148046
| | |||| ||| ||| |||||| || ||| | | |||| || || | |
Sbjct 2234667 ACGATGCCGTTCG-AGTAGCCGTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTT 2234609
Query 148047 GTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCC--AAT 148104
|| | | | | || || |||||| || ||| || ||| |||||| || | |
Sbjct 2234608 ATGAATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATG--AGCGCACACGTCTTGAGC 2234551
Query 148105 GTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATT 148164
|| ||||||||| || || |||| || | | || ||||| || | |
Sbjct 2234550 GTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGC 2234491
Query 148165 TGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGA 148224
||||| ||||||| || ||| || || || ||||| ||||| | |
Sbjct 2234490 TGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCG 2234431
Query 148225 CTCATCATGCGATACGTCT-CAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283
||| | | |||| || ||| | || |||||||||| ||||| ||||| | ||
Sbjct 2234430 GACATGAGGTTGTACGACTGCAAGA-CGCGCTCGATGTCGTGACCGTGGATGCCGACGGC 2234372
Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATA 148343
||||||||||||||||||||| ||||||||||| || | || ||| || | ||
Sbjct 2234371 GACGCGCATGAGCATGTGCTGCGGTCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTA 2234312
Query 148344 TCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397
||||| |||||| | |||||||| ||||| ||||||| | |||||
Sbjct 2234311 GGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCGTA 2234258
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| |||||||||||||||||| || ||| || ||| |||
Sbjct 184817 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 184758
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| || |||| | |||| ||||| || || ||||| || |||||||| || ||
Sbjct 184757 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 184698
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || ||| | | || | || |||| || ||| || |||| || | ||| ||
Sbjct 184697 ATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 184638
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| || || || || | ||| || ||| ||
Sbjct 184637 CCCGTAAGTGTCTTGACGAAGATTTGCCTG 184608
>seq73
Length=1807266
Score = 89.7 bits (98), Expect = 5e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||| | ||||| || | | | ||||| ||||| |||||||||||| || |||
Sbjct 313154 ACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGT 313095
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| |||||||| || |||| | |||| ||||| || || ||||| || || ||
Sbjct 313094 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCC 313035
Query 132022 TTCTTTATC 132030
||| || ||
Sbjct 313034 TTCCTTGTC 313026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610270608160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |