Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq88 114 1e-20 seq73 89.7 5e-13 >seq88 Length=4649774 Score = 114 bits (126), Expect = 1e-20 Identities = 612/954 (64%), Gaps = 29/954 (3%) Strand=Plus/Minus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGG-CGTCGCTGTACTGCACGATTTC 147518 ||||| || |||| |||||||||||| ||| |||| || || ||||| | ||| || Sbjct 2235198 GCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGA-GTACTCAATGATCTC 2235140 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCC-GATTGC 147577 || ||||||||| | | || || || | || | || || |||| | |||| Sbjct 2235139 GGTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGC 2235080 Query 147578 ACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA--- 147634 ||||| ||| |||||||| |||| |||||| ||||| || | ||| | || Sbjct 2235079 G-GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGT 2235021 Query 147635 ACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCT 147694 ||| | || | ||||| | | | || | ||||||||| |||||||| || Sbjct 2235020 ACCAAAGC---TTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCT 2234964 Query 147695 CGTACAACCGCTCA-AACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGA 147753 || ||| || | ||||| ||||| ||| ||| |||||||| || |||| Sbjct 2234963 CGAACAGG-GCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCGGCGGG 2234906 Query 147754 -CACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCA 147812 || | || | |||| | || | || | || || |||||| |||||||| | ||| Sbjct 2234905 GCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCA 2234846 Query 147813 CAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATT 147872 ||||| | | ||||| || || | ||||| ||| ||| | | || | Sbjct 2234845 GAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTT-CTTGCGAAGGT 2234787 Query 147873 --AAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTA 147930 | | || | | ||| ||| |||||||| ||||| | ||||| || | || || | Sbjct 2234786 CCAGGAACTCGA-AGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCCAGGA 2234728 Query 147931 CGCTTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGT 147987 ||||| || || |||||||| | |||| | ||||||| | || || | |||||| Sbjct 2234727 CGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGG 2234668 Query 147988 TCCAGGCCGCTCGCAGT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTC 148046 | | |||| ||| ||| |||||| || ||| | | |||| || || | | Sbjct 2234667 ACGATGCCGTTCG-AGTAGCCGTTCGTACCGGCGATGTAGGAGCCGGTCGCGCGGATGTT 2234609 Query 148047 GTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCC--AAT 148104 || | | | | || || |||||| || ||| || ||| |||||| || | | Sbjct 2234608 ATGAATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATG--AGCGCACACGTCTTGAGC 2234551 Query 148105 GTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATT 148164 || ||||||||| || || |||| || | | || ||||| || | | Sbjct 2234550 GTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGC 2234491 Query 148165 TGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGA 148224 ||||| ||||||| || ||| || || || ||||| ||||| | | Sbjct 2234490 TGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCG 2234431 Query 148225 CTCATCATGCGATACGTCT-CAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283 ||| | | |||| || ||| | || |||||||||| ||||| ||||| | || Sbjct 2234430 GACATGAGGTTGTACGACTGCAAGA-CGCGCTCGATGTCGTGACCGTGGATGCCGACGGC 2234372 Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATA 148343 ||||||||||||||||||||| ||||||||||| || | || ||| || | || Sbjct 2234371 GACGCGCATGAGCATGTGCTGCGGTCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTA 2234312 Query 148344 TCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397 ||||| |||||| | |||||||| ||||| ||||||| | ||||| Sbjct 2234311 GGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCAAAATCGCGGTCGTA 2234258 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| |||||||||||||||||| || ||| || ||| ||| Sbjct 184817 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 184758 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| ||||| || || ||||| || |||||||| || || Sbjct 184757 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 184698 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || ||| | | || | || |||| || ||| || |||| || | ||| || Sbjct 184697 ATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 184638 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || || || | ||| || ||| || Sbjct 184637 CCCGTAAGTGTCTTGACGAAGATTTGCCTG 184608 >seq73 Length=1807266 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||| | ||||| || | | | ||||| ||||| |||||||||||| || ||| Sbjct 313154 ACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGT 313095 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| |||||||| || |||| | |||| ||||| || || ||||| || || || Sbjct 313094 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCC 313035 Query 132022 TTCTTTATC 132030 ||| || || Sbjct 313034 TTCCTTGTC 313026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610270608160