Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq88 145 8e-30 seq61 131 2e-25 seq73 116 4e-21 >seq88 Length=4649774 Score = 145 bits (160), Expect = 8e-30 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | || | ||| || || || ||||||||||||||||||||| | Sbjct 184835 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCC 184776 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| ||||| || | ||| ||||| || ||||| Sbjct 184775 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 184716 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || || |||||| ||| | ||||||||||| || || Sbjct 184715 ATGCCTTCCTTGTCTTGGATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACC 184656 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711 ||||| || || || || || || | || || ||||| |||||| Sbjct 184655 TCGAGGGTGATCGTCTTGCCCGTAAGTGTCTTGACGAAGATTTGC 184611 >seq61 Length=3738257 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | ||| | ||| ||||| || ||||| || |||||||| ||| | Sbjct 596991 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 596932 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||| ||||| || || ||||| |||||||| ||||| || Sbjct 596931 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 596872 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | || || || ||||| || Sbjct 596871 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 596812 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| | || || || ||||||||||| Sbjct 596811 TCGAGTGTGATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765 >seq73 Length=1807266 Score = 116 bits (128), Expect = 4e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || |||||||| |||||||||||| | | |||| | Sbjct 313150 AGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGG 313091 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| ||||| || | ||| ||||| || || || || ||||| Sbjct 313090 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCC 313031 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | || |||||||| || || ||||| || Sbjct 313030 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTG 312971 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 ||||| || || || | || || || || ||||||| Sbjct 312970 ATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 312934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397414473120