Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq61 95.1 1e-14
seq73 87.8 2e-12
>seq61
Length=3738257
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||| || || || || |||||||||||| | |||| |||| |||
Sbjct 872279 ACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGACCGTCCTCG 872220
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || || | || | ||||| || || || || | ||||| ||||| |
Sbjct 872219 AGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGG 872160
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| || | | | || | || || | || ||| || || || || || | |||
Sbjct 872159 ATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTTG 872100
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || || |||||||||||||||
Sbjct 872099 CCGGTCAGGGTCTTGACAAAGATTTGCATA 872070
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||| || || || || || ||||| ||| | |||| |||| ||
Sbjct 597429 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 597370
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | || | ||||| || || || || | ||||| || ||
Sbjct 597369 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 597310
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| || | | | || | ||||||| || ||| || || || || || | |||
Sbjct 597309 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTG 597250
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || || || ||||||||||||
Sbjct 597249 CCGGTCAGGGTCTTGACGAAGATTTGCATA 597220
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||| || || || || || ||||| ||| | |||| |||| ||
Sbjct 597885 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 597826
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | || | ||||| || || || || | ||||| || ||
Sbjct 597825 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 597766
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| || | | | || | ||||||| || ||| || || || || || | |||
Sbjct 597765 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTG 597706
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || || || ||||||||||||
Sbjct 597705 CCGGTCAGGGTCTTGACGAAGATTTGCATA 597676
>seq73
Length=1807266
Score = 87.8 bits (96), Expect = 2e-12
Identities = 155/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | ||||| || | || || || ||||| || ||||||||| |
Sbjct 313159 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 313100
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| | || |||||||| || ||||| | |||||||| || || || || ||
Sbjct 313099 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 313040
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| || || || || ||||||| || | | | || | || || | | || ||
Sbjct 313039 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACC 312980
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCA 27246
|| || || || | |||||||| || || || |||||||||||||
Sbjct 312979 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 312934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933592093472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |