Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq88 199 5e-46 >seq88 Length=4649774 Score = 199 bits (220), Expect = 5e-46 Identities = 565/859 (66%), Gaps = 17/859 (2%) Strand=Plus/Minus Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 ||||| || |||| ||| || || | | |||||| | | |||||| || || || Sbjct 2235198 GCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCG 2235139 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 ||||||| ||| || ||| || ||||| | ||||||||| || || || |||| Sbjct 2235138 GTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 2235079 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || |||||||| |||||| | || | || || || |||| | |||||| || | | Sbjct 2235078 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGTAC 2235019 Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 || | | | || || || | || ||||| || ||||| | ||||| || | | Sbjct 2235018 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 2234960 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 ||||| |||||||| || | | || ||| || || || | | |||||||| Sbjct 2234959 CAGGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAA 2234900 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 ||| | ||| | || | |||| || |||| ||| ||||| || || ||||||||||| Sbjct 2234899 GAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGAGCGC 2234840 Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 |||||||||| ||| ||| |||| || | || || || || | |||| || Sbjct 2234839 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 2234780 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG--- 119185 || | || || |||||||||||||| ||||| | ||||| | || | |||| Sbjct 2234779 CTCGAAGACGTCAGCGTGCCACGGTTCGAGGTAGATCGCGAAGGCTCC---AGGACGCTT 2234723 Query 119186 ---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242 ||| | |||| || || | ||| ||| ||| | ||||| ||||| || | ||| Sbjct 2234722 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGAT 2234663 Query 119243 ACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGG 119300 || | || | ||| || || || ||| || ||| | | || | || | || Sbjct 2234662 GCCGTTCGAGTAGCCGTTCGTACCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTATGA 2234605 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 ||| || ||| ||||| || || ||| || || |||| ||| | |||| || || Sbjct 2234604 ATGCTCAAACCGATACCGCCGGCGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTCG 2234545 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 ||||| || || ||||| || |||| | | || ||||| ||| ||| | || || Sbjct 2234544 TAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGG 2234485 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 119480 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 2234484 TGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATG 2234425 Query 119481 TTGTCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||| | || ||||||| || | ||||| | ||||| || |||| | ||| || Sbjct 2234424 AGGTTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACGCG 2234366 Query 119540 CATAAACATGTATTGGGGT 119558 ||| | ||||| || ||| Sbjct 2234365 CATGAGCATGTGCTGCGGT 2234347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433994051360