Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq88 439 3e-118 seq84 91.5 2e-13 seq73 84.2 2e-11 >seq88 Length=4649774 Score = 439 bits (486), Expect = 3e-118 Identities = 791/1142 (69%), Gaps = 18/1142 (2%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||||| ||||||||||| || ||||| || ||| ||| Sbjct 2234348 CCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 2234407 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 || | ||| |||| ||| | || | ||| || ||||| ||||||| || ||| Sbjct 2234408 TTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTC 2234467 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 |||||||| ||| |||||||| | ||| ||||||||| || | |||||||| || Sbjct 2234468 AACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGAT 2234527 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||| ||||||||||| ||||||||| ||| |||| ||| |||||| |||| Sbjct 2234528 TCGATTGAAGGCATCTACGACACGCTCAAGACGTGTGCGCTCATTTCCAAGACCGCCGGC 2234587 Query 19343 GGTATCGGGATC--CACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGA 19400 |||||||| | || | | || ||||| ||| || | ||| || |||| Sbjct 2234588 GGTATCGGTTTGAGCATTCAT--AACATCCGCGCGACCGGCTCCTACATCGCCGGTACGA 2234645 Query 19401 ACGGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTAC 19459 |||| || ||| ||| |||||||| |||||||| |||| ||||||||| || | ||| Sbjct 2234646 ACGGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 2234704 Query 19460 GTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCAC 19519 ||| |||| || ||| ||| || || | ||||| ||||||||||| || |||||| Sbjct 2234705 GTCGACCAAGGTGGCAACAAGCGTCCTGGAGCCTTCGCGATCTACCTCGAACCGTGGCAC 2234764 Query 19520 GCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGT 19579 || |||||| | || ||||| || || ||| |||||| || | ||||| | ||| | Sbjct 2234765 GCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCT 2234824 Query 19580 CGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGAC 19639 || || |||||| || | ||||||||||| || || |||||| || ||| | | Sbjct 2234825 CGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCGTGTCGAGGCCGCC 2234884 Query 19640 GAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAG 19699 | || |||| ||| | ||||| |||| ||| ||||| | ||| ||||| ||||| Sbjct 2234885 GGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAA 2234944 Query 19700 GCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGG 19759 | |||| | ||| | || |||| | ||||||| ||||||| | ||| Sbjct 2234945 GAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCC 2235004 Query 19760 GCCCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACAT 19818 || | | | ||| | |||| | ||| || ||||||||| ||||||| |||| ||| Sbjct 2235005 GCGCAAAAGCTTTGGTA-CGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTTCAT 2235063 Query 19819 GTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTC 19878 | ||||||||||||||| ||| || || || || |||||| | ||| |||||||||| Sbjct 2235064 GCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTC 2235123 Query 19879 GTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAA 19938 || |||||||| || || ||||| ||| || ||| || ||| ||||| || || Sbjct 2235124 CTCGAACCTGTGCACCGAGATCATTGAGTACTCGGCGCCCGATGAGTGCGCCGTCTGCAA 2235183 Query 19939 TCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATT 19998 | |||| || | |||||| || ||||| | | | |||||| || || Sbjct 2235184 TTTGGCCTCGATCGCGTTGCCGAGCTTTATCAAGAACGGCGTGTGCGACTTCAAGAAGTT 2235243 Query 19999 GTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA 20058 | ||||||| | ||||||| | || |||| ||| ||||||| |||| || Sbjct 2235244 GCACGAGGTCGTCAAGGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTA 2235303 Query 20059 -CCCG--ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGT 20115 |||| | ||| ||||| | || || | |||||||| || |||| ||||| || Sbjct 2235304 TCCCGTCATCGA---GGCGCAGTACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGT 2235360 Query 20116 CCAGGGCCTGGCCGACGTTTTCATGATGC-TCGGC-CTCTCATTCGACGATCCCAAGGCG 20173 || || || ||||||| |||||| || | ||| | | ||||| ||| ||||| Sbjct 2235361 GCAAGGGCTCGCCGACGCGTTCATG--GCATTGGCGATGCCGTTCGATTCGCCCGAGGCG 2235418 Query 20174 CGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGC 20233 ||| ||||||||||| ||||||||| || | |||||||| || || | |||||| Sbjct 2235419 CGCAAGCTCAACAAGCAAATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGC 2235478 Query 20234 GA 20235 || Sbjct 2235479 GA 2235480 Score = 432 bits (478), Expect = 4e-116 Identities = 795/1151 (69%), Gaps = 21/1151 (2%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 2235471 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCC 2235415 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGA-GCATCATGAAGACATCGGCCAGGCCCTGGACGC 78892 | || | ||||||| | ||| | || |||||| | ||||| || || || || | Sbjct 2235414 TCGGGCGAATCGAACGGCATCGCCAATGC--CATGAACGCGTCGGCGAGCCCTTGCACTC 2235357 Query 78893 CGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAA 78949 |||| |||| || |||||||| | |||| | | ||||||| | |||| || Sbjct 2235356 CGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTACTG---CGCCTCGATGACGGGATAGT 2235300 Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009 |||| ||||||| |||||||| ||| | ||||||| ||||||| ||| | Sbjct 2235299 AGTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACT 2235240 Query 79010 TGGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTG 79068 | ||| || | | | | ||| ||| || |||| | | ||| |||| ||| Sbjct 2235239 TCTTGAAGTCGCACACGCCGTTCTT-GATAAAGCTCGGCAACGCGATCGAGGCCAAATTG 2235181 Query 79069 CACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGAC 79128 || ||||| ||| || || || ||| ||||| || ||||||| || || ||| Sbjct 2235180 CAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCGGTGCACAGGTTCGAGGAC 2235121 Query 79129 TTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATG 79188 ||||| ||||| | |||||| ||||| |||| ||| ||||||||||||| |||| Sbjct 2235120 TTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATG 2235061 Query 79189 TACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGG 79248 |||| | ||||| || ||||| | ||||| ||| ||| | | | || || Sbjct 2235060 AACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGTACCAAAGCTTTTGCGCGGGG 2235001 Query 79249 ACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCC 79308 | ||||||| || |||| |||| || | ||| || ||| | || Sbjct 2235000 ATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCG 2234941 Query 79309 CCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCC 79368 |||||||| ||| | ||||| ||| ||| ||||| | ||| |||| || || | Sbjct 2234940 CCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCACTCGCCGGCG 2234881 Query 79369 TTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAA 79428 ||| || |||||| ||||| ||||| ||||| || || |||||| || || Sbjct 2234880 GCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATCACGAGCG 2234821 Query 79429 CGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGC 79488 || | ||||| | ||| |||||| || || || || || || | || ||| |||||| Sbjct 2234820 CGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGC 2234761 Query 79489 CACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTAC 79548 ||||| || || ||||| ||||| | || |||||| ||| || |||| |||||| Sbjct 2234760 CACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCTTGTTGCCACCTTGGTCGACGTAG 2234701 Query 79549 CGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTC 79608 || || ||||||||| | || ||||||||||| |||||||||| | | ||||||||| Sbjct 2234700 CGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTA 2234641 Query 79609 CCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGG--ATTCCGATGCCCCCGG 79666 ||| ||| | ||| |||| || ||||| | | || | ||||| || |||| Sbjct 2234640 CCGGCGATGTAGGAGCCGGTCGCGCGGATGTT--ATGAATGCTCAAACCGATACCGCCGG 2234583 Query 79667 ACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGT 79726 |||||| ||| |||| ||| ||||||||| ||||||||||| || ||||| |||| Sbjct 2234582 CGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGT 2234523 Query 79727 CCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGA 79786 ||||||| | ||||||||| ||| ||| | ||| |||| ||| ||||||||||||| Sbjct 2234522 CCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGA 2234463 Query 79787 GGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGC 79846 | ||||||| ||||| || ||| | | | ||| || | ||||| || | ||||| Sbjct 2234462 GCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTGCAAGACGC 2234403 Query 79847 GCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTC 79905 || || ||||| |||||||||||||| ||||||||||||| | || ||| || ||| Sbjct 2234402 GCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGCGGTCGT- 2234344 Query 79906 TCGCCGACATT 79916 ||| |||| || Sbjct 2234343 TCGGCGACCTT 2234333 Score = 134 bits (148), Expect = 2e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| ||||||||||||||||| || || |||||| ||||| | ||| Sbjct 2236280 GGCGCGCGTACGCAAGTAGTACATGCCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 2236221 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || || | |||| | ||| || || | ||||| ||||| || ||||| Sbjct 2236220 CATCGACGTGAGTTGCGCCATCGTTGGGCTCGACAAGTGAATGTTTAGCGATTGCGACTG 2236161 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||| ||| | ||||| |||||||| | || |||||| | | |||||||| |||||||| Sbjct 2236160 GTCAATGAAGGCACCTCGGTCGGCGGACAAGTCGATAATGGTCTTTTGCGAGATCTCCCA 2236101 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| || ||||| || || Sbjct 2236100 GACGGTCTTGTAGATTGCCTTGAGATC 2236074 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| || |||| |||||| ||||| ||| | || |||| ||| |||||| || | Sbjct 2236077 CTCAAGGCAATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTCC 2236136 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || |||| ||| |||||||| || ||||| || | | || || || Sbjct 2236137 GCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTAAACATTCACTTGTCGAGCCCA 2236196 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| | || | || ||||| | ||||||||| | || || ||||||||| Sbjct 2236197 ACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGC 2236256 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 2236257 ATGTACTACTTGCGTACGCGCGCC 2236280 >seq84 Length=1022938 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 |||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 125909 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 125968 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 125969 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 126003 >seq73 Length=1807266 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080 || ||||| ||| | || || ||||||||||| || || |||||||| ||||| | Sbjct 1386406 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGGCTCATGCCTGGCCTCTCT 1386465 Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 |||||||||||||| |||||||| ||||| || || ||| Sbjct 1386466 TTCTCCAACGAGCTCATTTCCCGCGACGAAGGTCTTCAT 1386504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523730376640