Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq88 439 3e-118
seq84 91.5 2e-13
seq73 84.2 2e-11
>seq88
Length=4649774
Score = 439 bits (486), Expect = 3e-118
Identities = 791/1142 (69%), Gaps = 18/1142 (2%)
Strand=Plus/Plus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162
|| ||| || | ||||||| ||||| ||||||||||| || ||||| || ||| |||
Sbjct 2234348 CCGCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 2234407
Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222
|| | ||| |||| ||| | || | ||| || ||||| ||||||| || |||
Sbjct 2234408 TTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTC 2234467
Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282
|||||||| ||| |||||||| | ||| ||||||||| || | |||||||| ||
Sbjct 2234468 AACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGAT 2234527
Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342
||||| ||||||||||| ||||||||| ||| |||| ||| |||||| ||||
Sbjct 2234528 TCGATTGAAGGCATCTACGACACGCTCAAGACGTGTGCGCTCATTTCCAAGACCGCCGGC 2234587
Query 19343 GGTATCGGGATC--CACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGA 19400
|||||||| | || | | || ||||| ||| || | ||| || ||||
Sbjct 2234588 GGTATCGGTTTGAGCATTCAT--AACATCCGCGCGACCGGCTCCTACATCGCCGGTACGA 2234645
Query 19401 ACGGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTAC 19459
|||| || ||| ||| |||||||| |||||||| |||| ||||||||| || | |||
Sbjct 2234646 ACGGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 2234704
Query 19460 GTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCAC 19519
||| |||| || ||| ||| || || | ||||| ||||||||||| || ||||||
Sbjct 2234705 GTCGACCAAGGTGGCAACAAGCGTCCTGGAGCCTTCGCGATCTACCTCGAACCGTGGCAC 2234764
Query 19520 GCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGT 19579
|| |||||| | || ||||| || || ||| |||||| || | ||||| | ||| |
Sbjct 2234765 GCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCT 2234824
Query 19580 CGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGAC 19639
|| || |||||| || | ||||||||||| || || |||||| || ||| | |
Sbjct 2234825 CGTGATCTCTTCTTTGCGCTCTGGATTCCGGATCTCTTTATGGAGCGTGTCGAGGCCGCC 2234884
Query 19640 GAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAG 19699
| || |||| ||| | ||||| |||| ||| ||||| | ||| ||||| |||||
Sbjct 2234885 GGCGAGTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAA 2234944
Query 19700 GCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGG 19759
| |||| | ||| | || |||| | ||||||| ||||||| | |||
Sbjct 2234945 GAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCC 2235004
Query 19760 GCCCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACAT 19818
|| | | | ||| | |||| | ||| || ||||||||| ||||||| |||| |||
Sbjct 2235005 GCGCAAAAGCTTTGGTA-CGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTTCAT 2235063
Query 19819 GTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTC 19878
| ||||||||||||||| ||| || || || || |||||| | ||| ||||||||||
Sbjct 2235064 GCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTC 2235123
Query 19879 GTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAA 19938
|| |||||||| || || ||||| ||| || ||| || ||| ||||| || ||
Sbjct 2235124 CTCGAACCTGTGCACCGAGATCATTGAGTACTCGGCGCCCGATGAGTGCGCCGTCTGCAA 2235183
Query 19939 TCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATT 19998
| |||| || | |||||| || ||||| | | | |||||| || ||
Sbjct 2235184 TTTGGCCTCGATCGCGTTGCCGAGCTTTATCAAGAACGGCGTGTGCGACTTCAAGAAGTT 2235243
Query 19999 GTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA 20058
| ||||||| | ||||||| | || |||| ||| ||||||| |||| ||
Sbjct 2235244 GCACGAGGTCGTCAAGGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTA 2235303
Query 20059 -CCCG--ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGT 20115
|||| | ||| ||||| | || || | |||||||| || |||| ||||| ||
Sbjct 2235304 TCCCGTCATCGA---GGCGCAGTACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGT 2235360
Query 20116 CCAGGGCCTGGCCGACGTTTTCATGATGC-TCGGC-CTCTCATTCGACGATCCCAAGGCG 20173
|| || || ||||||| |||||| || | ||| | | ||||| ||| |||||
Sbjct 2235361 GCAAGGGCTCGCCGACGCGTTCATG--GCATTGGCGATGCCGTTCGATTCGCCCGAGGCG 2235418
Query 20174 CGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGC 20233
||| ||||||||||| ||||||||| || | |||||||| || || | ||||||
Sbjct 2235419 CGCAAGCTCAACAAGCAAATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGC 2235478
Query 20234 GA 20235
||
Sbjct 2235479 GA 2235480
Score = 432 bits (478), Expect = 4e-116
Identities = 795/1151 (69%), Gaps = 21/1151 (2%)
Strand=Plus/Minus
Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834
||||||| | || |||||||| | | ||||||||| ||||||||||| |||||||
Sbjct 2235471 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCC 2235415
Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGA-GCATCATGAAGACATCGGCCAGGCCCTGGACGC 78892
| || | ||||||| | ||| | || |||||| | ||||| || || || || |
Sbjct 2235414 TCGGGCGAATCGAACGGCATCGCCAATGC--CATGAACGCGTCGGCGAGCCCTTGCACTC 2235357
Query 78893 CGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAA 78949
|||| |||| || |||||||| | |||| | | ||||||| | |||| ||
Sbjct 2235356 CGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTACTG---CGCCTCGATGACGGGATAGT 2235300
Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009
|||| ||||||| |||||||| ||| | ||||||| ||||||| ||| |
Sbjct 2235299 AGTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACT 2235240
Query 79010 TGGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTG 79068
| ||| || | | | | ||| ||| || |||| | | ||| |||| |||
Sbjct 2235239 TCTTGAAGTCGCACACGCCGTTCTT-GATAAAGCTCGGCAACGCGATCGAGGCCAAATTG 2235181
Query 79069 CACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGAC 79128
|| ||||| ||| || || || ||| ||||| || ||||||| || || |||
Sbjct 2235180 CAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCGGTGCACAGGTTCGAGGAC 2235121
Query 79129 TTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATG 79188
||||| ||||| | |||||| ||||| |||| ||| ||||||||||||| ||||
Sbjct 2235120 TTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATG 2235061
Query 79189 TACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGG 79248
|||| | ||||| || ||||| | ||||| ||| ||| | | | || ||
Sbjct 2235060 AACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCGTACCAAAGCTTTTGCGCGGGG 2235001
Query 79249 ACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCC 79308
| ||||||| || |||| |||| || | ||| || ||| | ||
Sbjct 2235000 ATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCG 2234941
Query 79309 CCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCC 79368
|||||||| ||| | ||||| ||| ||| ||||| | ||| |||| || || |
Sbjct 2234940 CCATAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCACTCGCCGGCG 2234881
Query 79369 TTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAA 79428
||| || |||||| ||||| ||||| ||||| || || |||||| || ||
Sbjct 2234880 GCCTCGACACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATCACGAGCG 2234821
Query 79429 CGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGC 79488
|| | ||||| | ||| |||||| || || || || || || | || ||| ||||||
Sbjct 2234820 CGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGC 2234761
Query 79489 CACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTAC 79548
||||| || || ||||| ||||| | || |||||| ||| || |||| ||||||
Sbjct 2234760 CACGGTTCGAGGTAGATCGCGAAGGCTCCAGGACGCTTGTTGCCACCTTGGTCGACGTAG 2234701
Query 79549 CGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTC 79608
|| || ||||||||| | || ||||||||||| |||||||||| | | |||||||||
Sbjct 2234700 CGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTA 2234641
Query 79609 CCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGG--ATTCCGATGCCCCCGG 79666
||| ||| | ||| |||| || ||||| | | || | ||||| || ||||
Sbjct 2234640 CCGGCGATGTAGGAGCCGGTCGCGCGGATGTT--ATGAATGCTCAAACCGATACCGCCGG 2234583
Query 79667 ACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGT 79726
|||||| ||| |||| ||| ||||||||| ||||||||||| || ||||| ||||
Sbjct 2234582 CGGTCTTGGAAATGAGCGCACACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGT 2234523
Query 79727 CCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGA 79786
||||||| | ||||||||| ||| ||| | ||| |||| ||| |||||||||||||
Sbjct 2234522 CCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGA 2234463
Query 79787 GGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGC 79846
| ||||||| ||||| || ||| | | | ||| || | ||||| || | |||||
Sbjct 2234462 GCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTGCAAGACGC 2234403
Query 79847 GCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTC 79905
|| || ||||| |||||||||||||| ||||||||||||| | || ||| || |||
Sbjct 2234402 GCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGCGGTCGT- 2234344
Query 79906 TCGCCGACATT 79916
||| |||| ||
Sbjct 2234343 TCGGCGACCTT 2234333
Score = 134 bits (148), Expect = 2e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242
|||||| || ||||| ||||||||||||||||| || || |||||| ||||| | |||
Sbjct 2236280 GGCGCGCGTACGCAAGTAGTACATGCCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 2236221
Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302
||| || || | |||| | ||| || || | ||||| ||||| || |||||
Sbjct 2236220 CATCGACGTGAGTTGCGCCATCGTTGGGCTCGACAAGTGAATGTTTAGCGATTGCGACTG 2236161
Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362
||| ||| | ||||| |||||||| | || |||||| | | |||||||| ||||||||
Sbjct 2236160 GTCAATGAAGGCACCTCGGTCGGCGGACAAGTCGATAATGGTCTTTTGCGAGATCTCCCA 2236101
Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389
|| |||| ||| || ||||| || ||
Sbjct 2236100 GACGGTCTTGTAGATTGCCTTGAGATC 2236074
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677
||||||| || |||| |||||| ||||| ||| | || |||| ||| |||||| || |
Sbjct 2236077 CTCAAGGCAATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTCC 2236136
Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737
||||| || || |||| ||| |||||||| || ||||| || | | || || ||
Sbjct 2236137 GCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTAAACATTCACTTGTCGAGCCCA 2236196
Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797
| ||||| | || | || ||||| | ||||||||| | || || |||||||||
Sbjct 2236197 ACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGC 2236256
Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821
|||||||| |||| || || |||
Sbjct 2236257 ATGTACTACTTGCGTACGCGCGCC 2236280
>seq84
Length=1022938
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083
|||||||| | | || ||||||||||| ||||||||| | ||||| || ||| |||
Sbjct 125909 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 125968
Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118
||||||||||| || || || ||||||||||||||
Sbjct 125969 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 126003
>seq73
Length=1807266
Score = 84.2 bits (92), Expect = 2e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080
|| ||||| ||| | || || ||||||||||| || || |||||||| ||||| |
Sbjct 1386406 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGGCTCATGCCTGGCCTCTCT 1386465
Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119
|||||||||||||| |||||||| ||||| || || |||
Sbjct 1386466 TTCTCCAACGAGCTCATTTCCCGCGACGAAGGTCTTCAT 1386504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548523730376640
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