Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq88 327 1e-84 seq73 138 1e-27 >seq88 Length=4649774 Score = 327 bits (362), Expect = 1e-84 Identities = 535/766 (70%), Gaps = 6/766 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 |||||||||||||| | || ||||||||| ||||| | ||| ||| || ||||| Sbjct 2234361 TCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACA 2234420 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| | | |||||||| |||||| |||| || || |||||||| || ||| Sbjct 2234421 ACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 2234480 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 |||||| ||| | ||| ||| |||||||| |||||||||| || ||||| || |||| Sbjct 2234481 CTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCA 2234540 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT-- 53430 ||||||| ||||||||| |||||| | ||| |||||| | || ||||||||| | Sbjct 2234541 TCTACGACACGCTCAAGACGTGTGCGCTCATTTCCAAGACCGCCGGCGGTATCGGTTTGA 2234600 Query 53431 CCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | | ||| |||| |||| |||| | ||| || ||||||||| | | | Sbjct 2234601 GCATTCAT--AACATCCGCGCGACCGGCTCCTACATCGCCGGTACGAACGGCTACTCGAA 2234658 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || ||||| || |||||||| |||| ||||||||| || || |||||| |||| ||||| Sbjct 2234659 CGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGG 2234718 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 ||||| || | ||||| ||||||||||| ||||||||||| ||| | | || Sbjct 2234719 CAACAAGCGTCCTGGAGCCTTCGCGATCTACCTCGAACCGTGGCACGCTGACGTCTTCGA 2234778 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 ||| || || || || ||| || || | || || | ||| ||||| || || Sbjct 2234779 GTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTT 2234838 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 || || ||||||||||| ||||| ||| | || ||| | || |||||| ||| Sbjct 2234839 TGCGCTCTGGATTCCGGATCTCTTTATGGAGCGTGTCGAGGCCGCCGGCGAGTGGCCCCT 2234898 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 | ||||| ||| |||||||||||| | ||||| || || ||||| || | Sbjct 2234899 CTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGAGTTCCGCGCCCT 2234958 Query 53791 GTATCG-GACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849 || ||| || |||| | |||||||| |||||||| | || |||| || | | Sbjct 2234959 GT-TCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTT 2235017 Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909 || | || || ||| | |||||| || || || | |||| |||| ||||||||| Sbjct 2235018 GGTACGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACG 2235077 Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATC 53955 | | ||| |||| ||||| |||||| | ||| ||||| || Sbjct 2235078 CCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTC 2235123 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785 |||||||| || ||| ||| || |||||||| | || |||| | || ||| || Sbjct 2236076 TCTCAAGGCAATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTC 2236135 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 || || || ||||| | ||| |||||||| || || || ||||| | || || || Sbjct 2236136 CGCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTAAACATTCACTTGTCGAGCCC 2236195 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | |||| | | | ||||||||||| ||||| |||||| ||||| |||||||| Sbjct 2236196 AACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGG 2236255 Query 55906 TATGTACTATCTGCGGACCCGCGCC 55930 |||||||| |||| || |||||| Sbjct 2236256 CATGTACTACTTGCGTACGCGCGCC 2236280 >seq73 Length=1807266 Score = 138 bits (152), Expect = 1e-27 Identities = 307/455 (67%), Gaps = 8/455 (2%) Strand=Plus/Plus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 |||| || || || ||||| | ||| ||||||| | ||| || | || ||| ||| Sbjct 1174313 ATCCCGTTCCAATACCCTCCGAACCATTGACCAAAGCCATGGGGATGATGGGGATGTACC 1174372 Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993 | |||||| | |||||| ||||| | | ||||| | ||| | ||||| | Sbjct 1174373 AAGACGGCTCGATGCTTTGACCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGG 1174432 Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACG--CGTGAAGATGTATCGGGAGCTG-- 152049 ||| || | | || || || ||| | | ||| |||||||||||| | |||| | Sbjct 1174433 GATGAAAGACGCTACGCGTGAT-GGA-TGATACGTTCGTGAAGATGTAAC--GAGCCGAA 1174488 Query 152050 GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTG 152109 ||||| || || |||||| ||| || || ||||| || || || ||||| | |||| Sbjct 1174489 GCCGCGTCTTTACCACCTTGCAGACGAGTGCCAAATTGACCGTTCGGGTCGAGAACGTTG 1174548 Query 152110 AGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCT 152169 |||||||||| || ||||| | || |||| | || ||||| |||| |||| | Sbjct 1174549 AGGTTGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATT 1174608 Query 152170 TCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATG 152229 |||||||| || ||||||| ||||| |||| ||| || |||| || | ||||| || Sbjct 1174609 TCACCGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATC 1174668 Query 152230 TCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAA 152289 || |||||| || ||||| || || | | |||||||| || ||||| || Sbjct 1174669 TCTTGCGTCAGCTTGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGTTTGAAC 1174728 Query 152290 CCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 || || | || ||||| |||||| | |||| Sbjct 1174729 CCATCAATGACAGAGGGAATAGAACGCACGTTGTC 1174763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214932928800