Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq88 327 1e-84
seq73 138 1e-27
>seq88
Length=4649774
Score = 327 bits (362), Expect = 1e-84
Identities = 535/766 (70%), Gaps = 6/766 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
|||||||||||||| | || ||||||||| ||||| | ||| ||| || |||||
Sbjct 2234361 TCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACA 2234420
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| | | |||||||| |||||| |||| || || |||||||| || |||
Sbjct 2234421 ACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 2234480
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|||||| ||| | ||| ||| |||||||| |||||||||| || ||||| || ||||
Sbjct 2234481 CTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCA 2234540
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT-- 53430
||||||| ||||||||| |||||| | ||| |||||| | || ||||||||| |
Sbjct 2234541 TCTACGACACGCTCAAGACGTGTGCGCTCATTTCCAAGACCGCCGGCGGTATCGGTTTGA 2234600
Query 53431 CCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | | ||| |||| |||| |||| | ||| || ||||||||| | | |
Sbjct 2234601 GCATTCAT--AACATCCGCGCGACCGGCTCCTACATCGCCGGTACGAACGGCTACTCGAA 2234658
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| ||||| || |||||||| |||| ||||||||| || || |||||| |||| |||||
Sbjct 2234659 CGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGG 2234718
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
||||| || | ||||| ||||||||||| ||||||||||| ||| | | ||
Sbjct 2234719 CAACAAGCGTCCTGGAGCCTTCGCGATCTACCTCGAACCGTGGCACGCTGACGTCTTCGA 2234778
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670
||| || || || || ||| || || | || || | ||| ||||| || ||
Sbjct 2234779 GTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTT 2234838
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
|| || ||||||||||| ||||| ||| | || ||| | || |||||| |||
Sbjct 2234839 TGCGCTCTGGATTCCGGATCTCTTTATGGAGCGTGTCGAGGCCGCCGGCGAGTGGCCCCT 2234898
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790
| ||||| ||| |||||||||||| | ||||| || || ||||| || |
Sbjct 2234899 CTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGAGTTCCGCGCCCT 2234958
Query 53791 GTATCG-GACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849
|| ||| || |||| | |||||||| |||||||| | || |||| || | |
Sbjct 2234959 GT-TCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTT 2235017
Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909
|| | || || ||| | |||||| || || || | |||| |||| |||||||||
Sbjct 2235018 GGTACGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACG 2235077
Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATC 53955
| | ||| |||| ||||| |||||| | ||| ||||| ||
Sbjct 2235078 CCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTC 2235123
Score = 100 bits (110), Expect = 3e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785
|||||||| || ||| ||| || |||||||| | || |||| | || ||| ||
Sbjct 2236076 TCTCAAGGCAATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTC 2236135
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
|| || || ||||| | ||| |||||||| || || || ||||| | || || ||
Sbjct 2236136 CGCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTAAACATTCACTTGTCGAGCCC 2236195
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| |||| | | | ||||||||||| ||||| |||||| ||||| ||||||||
Sbjct 2236196 AACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGG 2236255
Query 55906 TATGTACTATCTGCGGACCCGCGCC 55930
|||||||| |||| || ||||||
Sbjct 2236256 CATGTACTACTTGCGTACGCGCGCC 2236280
>seq73
Length=1807266
Score = 138 bits (152), Expect = 1e-27
Identities = 307/455 (67%), Gaps = 8/455 (2%)
Strand=Plus/Plus
Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933
|||| || || || ||||| | ||| ||||||| | ||| || | || ||| |||
Sbjct 1174313 ATCCCGTTCCAATACCCTCCGAACCATTGACCAAAGCCATGGGGATGATGGGGATGTACC 1174372
Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993
| |||||| | |||||| ||||| | | ||||| | ||| | ||||| |
Sbjct 1174373 AAGACGGCTCGATGCTTTGACCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGG 1174432
Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACG--CGTGAAGATGTATCGGGAGCTG-- 152049
||| || | | || || || ||| | | ||| |||||||||||| | |||| |
Sbjct 1174433 GATGAAAGACGCTACGCGTGAT-GGA-TGATACGTTCGTGAAGATGTAAC--GAGCCGAA 1174488
Query 152050 GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTG 152109
||||| || || |||||| ||| || || ||||| || || || ||||| | ||||
Sbjct 1174489 GCCGCGTCTTTACCACCTTGCAGACGAGTGCCAAATTGACCGTTCGGGTCGAGAACGTTG 1174548
Query 152110 AGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCT 152169
|||||||||| || ||||| | || |||| | || ||||| |||| |||| |
Sbjct 1174549 AGGTTGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATT 1174608
Query 152170 TCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATG 152229
|||||||| || ||||||| ||||| |||| ||| || |||| || | ||||| ||
Sbjct 1174609 TCACCGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATC 1174668
Query 152230 TCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAA 152289
|| |||||| || ||||| || || | | |||||||| || ||||| ||
Sbjct 1174669 TCTTGCGTCAGCTTGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGTTTGAAC 1174728
Query 152290 CCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
|| || | || ||||| |||||| | ||||
Sbjct 1174729 CCATCAATGACAGAGGGAATAGAACGCACGTTGTC 1174763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214932928800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |