Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq88 87.8 2e-12 >seq88 Length=4649774 Score = 87.8 bits (96), Expect = 2e-12 Identities = 283/436 (65%), Gaps = 4/436 (1%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 || || | |||||||||||| || ||||| || |||| || ||||| || | | | Sbjct 2234874 ACACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACT 2234815 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 || || || || ||||| ||| || || ||||| | | |||| ||||| ||| Sbjct 2234814 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGT 2234755 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182 || || || || || | ||||||| || || || || || || || | || | ||| Sbjct 2234754 TCGAGGTAGATCGCGAAGGCTCCAGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 2234695 Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242 ||||| || || || | | ||| || | || ||||| || || || || || | Sbjct 2234694 GTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTACCGGCG 2234635 Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302 || || || | ||||| || ||| |||| | || || || || || |||| Sbjct 2234634 ATGTAGGAGCCGGTCGCGCGGATGTTATGAATGCTCAAACCGATACCGCCGGCGGTCTTG 2234575 Query 78303 GATATTAGAGCGCA-ACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA 78360 || || ||||||| |||| || | || |||||||| || || || || ||| ||| Sbjct 2234574 GAAAT--GAGCGCACACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCA 2234517 Query 78361 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCG 78420 | | | || |||||| || | || | ||| ||||| || || || | |||| Sbjct 2234516 TCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCG 2234457 Query 78421 GAGATGCATGCGTAAA 78436 | || || || ||||| Sbjct 2234456 GCGAGGCGTGGGTAAA 2234441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667445395840