Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12-
23] 156 sequences; 39,900,209 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq88 87.8 2e-12
>seq88
Length=4649774
Score = 87.8 bits (96), Expect = 2e-12
Identities = 283/436 (65%), Gaps = 4/436 (1%)
Strand=Plus/Minus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|| || | |||||||||||| || ||||| || |||| || ||||| || | | |
Sbjct 2234874 ACACGCTCCATAAAGAGATCCGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACT 2234815
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
|| || || || ||||| ||| || || ||||| | | |||| ||||| |||
Sbjct 2234814 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGT 2234755
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182
|| || || || || | ||||||| || || || || || || || | || | |||
Sbjct 2234754 TCGAGGTAGATCGCGAAGGCTCCAGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 2234695
Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242
||||| || || || | | ||| || | || ||||| || || || || || |
Sbjct 2234694 GTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTACCGGCG 2234635
Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302
|| || || | ||||| || ||| |||| | || || || || || ||||
Sbjct 2234634 ATGTAGGAGCCGGTCGCGCGGATGTTATGAATGCTCAAACCGATACCGCCGGCGGTCTTG 2234575
Query 78303 GATATTAGAGCGCA-ACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA 78360
|| || ||||||| |||| || | || |||||||| || || || || ||| |||
Sbjct 2234574 GAAAT--GAGCGCACACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCA 2234517
Query 78361 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCG 78420
| | | || |||||| || | || | ||| ||||| || || || | ||||
Sbjct 2234516 TCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCG 2234457
Query 78421 GAGATGCATGCGTAAA 78436
| || || || |||||
Sbjct 2234456 GCGAGGCGTGGGTAAA 2234441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694667445395840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |