Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015485.1_202016-12- 23] 156 sequences; 39,900,209 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq61 181 2e-40 seq88 176 9e-39 seq73 172 1e-37 seq71 98.7 2e-15 >seq61 Length=3738257 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || |||||||| |||| || | ||| || || ||||||||||| || || Sbjct 597676 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 597617 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || |||||||| || || ||||| || Sbjct 597616 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 597557 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| || || ||| | ||||| || ||||| | |||||| Sbjct 597556 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 597497 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || ||||| ||||| || || || ||||| Sbjct 597496 CTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 597449 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || |||||||| |||| || | ||| || || ||||||||||| || || Sbjct 596992 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 596933 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || |||||||| || || ||||| || Sbjct 596932 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 596873 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| || || ||| | ||||| || ||||| | |||||| Sbjct 596872 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 596813 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| || || || ||||| Sbjct 596812 CTCGAGTGTGATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 596765 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || |||||||| |||| || | ||| || || ||||||||||| || || Sbjct 597448 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 597389 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || |||||||| || || ||||| || Sbjct 597388 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 597329 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| || || ||| | ||||| ||||| || | |||||| Sbjct 597328 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGAC 597269 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || |||| ||||| ||||| || ||||| Sbjct 597268 CTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597221 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || |||||||| |||| || | ||| || || ||||||||||| || || Sbjct 872070 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 872011 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || |||||||| || || ||||| || Sbjct 872010 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 871951 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||| ||||| | || ||| | || || |||||||| | ||||| Sbjct 871950 GATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGAC 871891 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||| | ||||| || || |||||||| Sbjct 871890 CTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 871843 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || |||||||| |||| || | ||| || || ||||||||||| || || Sbjct 597220 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 597161 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || |||||||| || || ||||| || Sbjct 597160 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 597101 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || || || || || ||| | ||||| || ||||| | |||||| Sbjct 597100 AATGCCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 597041 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || |||| ||||| || || || ||||| Sbjct 597040 CTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 596993 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||| |||||||| || Sbjct 872298 ACCACCACGAAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGC 872239 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| || ||||| || || || || ||||||||||| || || ||||| || Sbjct 872238 GAGCGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGGTCGGGGGG 872179 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || |||||||| || || ||| | ||||| || ||||| | |||||| Sbjct 872178 AATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 872119 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || |||| ||||| || || || ||||| Sbjct 872118 CTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 872071 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| || | ||| || || ||||||||||| || || Sbjct 597903 CCCCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 597844 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || || || |||||||| || || ||||| ||| Sbjct 597843 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 597784 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| || || ||| | ||||| ||||| || | |||||| Sbjct 597783 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 597724 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||||||| || |||| ||||| ||||| || ||||| Sbjct 597723 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 597677 >seq88 Length=4649774 Score = 176 bits (194), Expect = 9e-39 Identities = 174/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || ||||| || |||| || | || || ||||| ||||||||||| || Sbjct 184835 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCC 184776 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | |||||||||||||| || || || ||||||||||| | |||||| ||||| ||| Sbjct 184775 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 184716 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| | ||| ||| | ||||| ||||| || | ||||| Sbjct 184715 ATGCCTTCCTTGTCTTGGATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACC 184656 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||||| ||||||||||| ||||| | ||||| ||||| || ||| Sbjct 184655 TCGAGGGTGATCGTCTTGCCCGTAAGTGTCTTGACGAAGATTTGC 184611 >seq73 Length=1807266 Score = 172 bits (190), Expect = 1e-37 Identities = 178/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | || || ||||||||||||||||| || Sbjct 313160 ACCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGC 313101 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||||| || || || ||||||||||| | |||||| ||||| || Sbjct 313100 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGG 313041 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| |||||||| || || ||| | ||||| || || || | ||||| Sbjct 313040 GATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGAC 312981 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA 283104 ||||| ||||| ||||| ||||| | ||||| || || || |||| | ||| Sbjct 312980 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCACTGTCA 312928 >seq71 Length=931223 Score = 98.7 bits (108), Expect = 2e-15 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 316183 TAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 316242 |||||||| ||||||||||| | | |||| | ||||| || ||||||||||||||||| Sbjct 332120 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCAAGGTGTTCCTCGATGTGGTGGAAC 332179 Query 316243 GCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 316284 ||||| || |||||||| || | ||||| || || |||||| Sbjct 332180 GCGTGTTGAGCCACGTACGCGACACGCAAGTTAGGGTGCTTC 332221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737107830024