Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq143 107 1e-18 >seq143 Length=1035691 Score = 107 bits (118), Expect = 1e-18 Identities = 228/338 (67%), Gaps = 2/338 (1%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||| ||||| || |||||| || ||| | | | | | Sbjct 262046 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGAGAACC 262105 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 || | || || || || || || || |||||| | | |||| ||||| Sbjct 262106 TGCATCAACTGATCGACCCCCTCCCCGCGATAATCATCCTTGGCGGTCCTATACTCTGCG 262165 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106 |||||||| ||||||||||| ||||| || ||||| | |||||| || || || | Sbjct 262166 CCGAAATGTCTCCACTGAAACCCATAAACCGGTCCCAAATCTCCCTCTTCCCTATGTCCC 262225 Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166 || |||| || || | |||| ||| ||||||||| |||||||||| | || || | Sbjct 262226 AACCCAACCTTGTCCAGAAATTGTCTCGATCCATTCCCATCCCAAATCTTGAC-CCCCTT 262284 Query 102167 GCT-GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAAC 102225 | | |||| |||| || || ||||||| | ||||| | ||||| || | | Sbjct 262285 GTTGGATAATAATTTGGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGAT 262344 Query 102226 ACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAA 102263 ||||| | ||| || |||| || || ||||| |||| Sbjct 262345 ACCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGGAA 262382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250209381475