Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq143 107 1e-18
>seq143
Length=1035691
Score = 107 bits (118), Expect = 1e-18
Identities = 228/338 (67%), Gaps = 2/338 (1%)
Strand=Plus/Plus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
|||||||||| || | ||||| ||||| || |||||| || ||| | | | | |
Sbjct 262046 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGAGAACC 262105
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046
|| | || || || || || || || |||||| | | |||| |||||
Sbjct 262106 TGCATCAACTGATCGACCCCCTCCCCGCGATAATCATCCTTGGCGGTCCTATACTCTGCG 262165
Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106
|||||||| ||||||||||| ||||| || ||||| | |||||| || || || |
Sbjct 262166 CCGAAATGTCTCCACTGAAACCCATAAACCGGTCCCAAATCTCCCTCTTCCCTATGTCCC 262225
Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166
|| |||| || || | |||| ||| ||||||||| |||||||||| | || || |
Sbjct 262226 AACCCAACCTTGTCCAGAAATTGTCTCGATCCATTCCCATCCCAAATCTTGAC-CCCCTT 262284
Query 102167 GCT-GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAAC 102225
| | |||| |||| || || ||||||| | ||||| | ||||| || | |
Sbjct 262285 GTTGGATAATAATTTGGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGAT 262344
Query 102226 ACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAA 102263
||||| | ||| || |||| || || ||||| ||||
Sbjct 262345 ACCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGGAA 262382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250209381475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |