Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq119 145 9e-30 >seq119 Length=1057158 Score = 145 bits (160), Expect = 9e-30 Identities = 422/646 (65%), Gaps = 8/646 (1%) Strand=Plus/Minus Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069 |||||| ||| | ||| || || | |||||||||||| || ||||| || || | || Sbjct 672840 CCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAA 672781 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 ||||| | | | |||||| || || ||||| ||| || |||||| | | Sbjct 672780 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 672721 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 || |||| |||||||| || | ||| || | | |||| || || ||||| || || Sbjct 672720 GATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 672661 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 || || | ||| | |||||||| || || || | | ||| |||| || || || || Sbjct 672660 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGA 672601 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309 || || || |||| ||| ||| ||| | || || || || ||| | ||| Sbjct 672600 GTAGCCGTTCGTACCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACC 672541 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 || || || || | || || || | ||||| || | ||| || |||||||| || Sbjct 672540 GATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTC 672481 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429 || ||| ||| |||| | | || |||||| || | || | || ||||| Sbjct 672480 AATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCC 672421 Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 || ||||| | || || || ||||| ||||| | || || | || ||||||| Sbjct 672420 GGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGA 672361 Query 54490 CTCGATAGCTGAG-TCTATATCCCATTGA---TGAATTCCTACTGCGACACGCATTAACA 54545 ||| | || | | || || || ||| || || || | ||||||||||| | || Sbjct 672360 CTCCA-AGACGCGCTCGATGTC---GTGACCGTGGATGCCGATGGCGACACGCATGAGCA 672305 Query 54546 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAG 54605 ||||||| || | ||| ||| |||| || || ||||||||||| || | | Sbjct 672304 TGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCG 672245 Query 54606 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651 |||| || ||||| |||||||| ||| || || ||||| ||||| Sbjct 672244 TTTTGAAGCCAAAGTAGTTGTAACCAAAATCGCGGTCGTAGATAAT 672199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719930158000