Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq91 141 1e-28 seq77 114 1e-20 >seq91 Length=2005964 Score = 141 bits (156), Expect = 1e-28 Identities = 174/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 ||| ||||| |||| | ||| | |||||| |||| || |||||| || || ||||| Sbjct 620833 CTACTGTCCCCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTA 620774 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 ||| || || || || |||| || |||||||| || ||||| || | |||||||||||| Sbjct 620773 ATCGGCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTC 620714 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCG 43128 || || | || |||||||||| ||| || |||| ||| | | | |||||| | Sbjct 620713 GGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCTGAGG 620655 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || |||| ||| || || ||||| || || ||||| || ||||||||||| Sbjct 620654 ATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 620600 Score = 134 bits (148), Expect = 2e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 618985 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 618926 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| Sbjct 618925 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 618866 Query 43094 GATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | |||||| ||||| || |||| ||| || || | Sbjct 618865 GATCTTGGCCTTGA-CGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCT 618807 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| |||||||||||||| Sbjct 618806 TGCCGGTCAGGGTCTTGACAAAGATTTGCAT 618776 Score = 134 bits (148), Expect = 2e-26 Identities = 160/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 619213 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 619154 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| | Sbjct 619153 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-T 619095 Query 43094 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 || |||| | |||| ||| | | | ||| || ||||| || |||| ||| || || Sbjct 619094 GAATTTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTC 619036 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || ||||| |||||||||||||| Sbjct 619035 TTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 619004 Score = 134 bits (148), Expect = 2e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 619669 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 619610 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| Sbjct 619609 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 619550 Query 43094 GATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | |||||| ||||| || |||| ||| || || | Sbjct 619549 GATCTTGGCCTTGA-CGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCT 619491 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| |||||||||||||| Sbjct 619490 TGCCGGTCAGGGTCTTGACAAAGATTTGCAT 619460 Score = 134 bits (148), Expect = 2e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 620353 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 620294 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| Sbjct 620293 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 620234 Query 43094 GATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | |||||| ||||| || |||| ||| || || | Sbjct 620233 GATCTTGGCCTTGA-CGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCT 620175 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| |||||||||||||| Sbjct 620174 TGCCGGTCAGGGTCTTGACAAAGATTTGCAT 620144 Score = 134 bits (148), Expect = 2e-26 Identities = 161/212 (76%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 882459 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 882400 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | | |||||||| | | Sbjct 882399 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGG-GGGGATACCCTCCTTGT-CTT 882342 Query 43094 GATTTTTTGT-TTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 || | || || |||| ||| | | | |||||| ||| || || |||| |||||| || Sbjct 882341 GAATCTTGGTCTTGA-CGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTC 882283 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||| |||||||| |||||||| ||||| Sbjct 882282 TTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 882251 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 618301 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 618242 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| Sbjct 618241 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 618182 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | |||||| ||||| || |||| ||| || || | Sbjct 618181 GATCTTGGCCTTGA-CGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCT 618123 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| ||||| |||||||| Sbjct 618122 TGCCGGTCAGGGTCTTGACAAAAATTTGCAT 618092 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 618529 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 618470 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| Sbjct 618469 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 618410 Query 43094 GATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | |||||| ||||| || |||| ||| || || | Sbjct 618409 GATCTTGGCCTTGA-CGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCT 618351 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || | ||||| |||||||||||||| Sbjct 618350 TGCCGGTCAAGGTCTTGACAAAGATTTGCAT 618320 Score = 125 bits (138), Expect = 8e-24 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 618757 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 618698 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| | Sbjct 618697 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-T 618639 Query 43094 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 || | || | |||| ||| | | | ||| || ||||| || |||| ||||| || Sbjct 618638 GAATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTC 618580 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | ||||| |||||||||||||| Sbjct 618579 TTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 618548 Score = 125 bits (138), Expect = 8e-24 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 619441 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 619382 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| | Sbjct 619381 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-T 619323 Query 43094 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 || | || | |||| ||| | | | ||| || ||||| || |||| ||||| || Sbjct 619322 GAATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCGACCTCGAGGGTGATCGTC 619264 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | ||||| |||||||||||||| Sbjct 619263 TTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619232 Score = 125 bits (138), Expect = 8e-24 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 619897 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 619838 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| | Sbjct 619837 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-T 619779 Query 43094 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 || | || | |||| ||| | | | ||| || ||||| || |||| ||||| || Sbjct 619778 GAATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTC 619720 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | ||||| |||||||||||||| Sbjct 619719 TTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619688 Score = 125 bits (138), Expect = 8e-24 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 620125 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 620066 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| | Sbjct 620065 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-T 620007 Query 43094 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 || | || | |||| ||| | | | ||| || ||||| || |||| ||||| || Sbjct 620006 GAATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTC 619948 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | ||||| |||||||||||||| Sbjct 619947 TTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619916 Score = 125 bits (138), Expect = 8e-24 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| || |||||| || || |||||||| || || || || |||| || Sbjct 620581 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTC 620522 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | |||||||||||||| || | || |||||||||| | Sbjct 620521 AAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-T 620463 Query 43094 GATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151 || | || | |||| ||| | | | ||| || ||||| || |||| ||||| || Sbjct 620462 GAATCTTGGCCTTGA-CGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTC 620404 Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || | ||||| |||||||||||||| Sbjct 620403 TTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 620372 Score = 123 bits (136), Expect = 3e-23 Identities = 171/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 42948 TCCTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 43007 ||||| || || || | | ||| | |||||| || | || |||||| || |||||| Sbjct 882713 TCCTACTGACCACCACGAAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTG 882654 Query 43008 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 43067 || || || || || || |||| || |||||||| || || || || | |||||||||| Sbjct 882653 TAGTCGGCGAGCGTGCGACCGTCCTCGAGCTGCTTGCCCGCAAAGATCAATCGCTGCTGG 882594 Query 43068 TCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCT 43126 |||| || | || |||||| ||| ||| || |||| ||| | | | ||| || Sbjct 882593 TCGGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTATCCGA 882535 Query 43127 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || |||| ||| || || ||||| || || ||||| |||||||||||||| Sbjct 882534 GGATTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 882478 >seq77 Length=440787 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | || ||||||||| || ||||| || |||| || || | || || Sbjct 313149 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTC 313090 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || || || ||||| || |||||||| | || | | ||||||||| Sbjct 313089 GAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTG 313030 Query 43094 GATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | ||| ||| ||| || || |||| |||||||| | Sbjct 313029 GATCTTGGCCTTGA-CGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTGATGGTCT 312971 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCA 43182 ||||||| || ||||| ||||||||||||| Sbjct 312970 TGCCCGTGAGGGTCTTGACAAAGATTTGCA 312941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815991763000