Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq119 156 9e-33 >seq119 Length=1057158 Score = 156 bits (172), Expect = 9e-33 Identities = 466/713 (65%), Gaps = 7/713 (1%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| ||| ||||| | ||||| | Sbjct 672163 GTCATCATGGCCAACGCCGACCGCCTTAACAGCGCCATTATCTACGACCGCGATTTTGGT 672222 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||||||||| ||| || || | || || || |||||| Sbjct 672223 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 672282 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| ||||||||| | ||||| || || |||| || ||| | ||| Sbjct 672283 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCATCGGCATCCACGGTCACGAC 672342 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | ||| |||||| | ||| || |||| | || || ||| | Sbjct 672343 ATCGAGCGCGTCTTGGAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCG 672402 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 ||||||||||| |||||||| || | || || ||||| || || || || | | Sbjct 672403 CCGACGCTCTTTAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCCTGTTTCCTGGTCAC 672461 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTT 249115 ||| | ||||| || | || ||||| || |||||||| || || | ||| |||| Sbjct 672462 GATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACTTGC-GCGCTCATTT 672520 Query 249116 CTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACA 249175 | || ||| || || |||||| | | | ||||||||| |||| || || |||| Sbjct 672521 CCAAGACCGCCGGTGGTATCGGTTTGAGCATTCACAACATCCGCGCGACTGGCTCCTACA 672580 Query 249176 TCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCA 249235 || ||||| || || | | || ||||| ||| | || || || | || Sbjct 672581 TCGCCGGTACGAACGGCTACTCGAACGGCATCGTTCCCATGCTCCGTGTCTACAACAACA 672640 Query 249236 CCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGG 249292 |||| | | | || |||| | || | || || | ||||| || || | | Sbjct 672641 CCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCG 672700 Query 249293 AAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGC 249352 | ||||||||| || || || |||||||||||| | |||||| ||||||| ||| Sbjct 672701 AGCCGTGGCACGCTGACATCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGG 672760 Query 249353 TCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCG 249412 | | || ||||| ||||||| | || ||| || |||| | || ||| || | Sbjct 672761 AAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTTATGGAGCGTG 672820 Query 249413 TCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465 || |||||| ||| || ||| | || | | || |||| ||||| | |||| Sbjct 672821 TCGAGGCCGCCGGTGAGTGGCCTCTCTTCTGCCCTGCCGAAGCCCCCGGCCTC 672873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763304532800