Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq119 129 8e-25 >seq119 Length=1057158 Score = 129 bits (142), Expect = 8e-25 Identities = 431/667 (65%), Gaps = 8/667 (1%) Strand=Plus/Minus Query 79899 TTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATC 79958 |||| |||| || | | | |||||| || | ||| || || | |||||||||||| Sbjct 672861 TTCGGCAGGGCAGAAGAGAGGCCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATC 672802 Query 79959 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTT 80018 || ||||| || || | || ||||| | | | ||||| || || ||||| Sbjct 672801 GGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTT 672742 Query 80019 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 80078 ||| || |||||| | | || |||| |||||||| || | ||| || || | | Sbjct 672741 GCGAAGGTCCAGGAACTCGAAGATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGC 672682 Query 80079 TCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 80138 ||| || || ||||| || || || || | ||| | |||||||| || || || | | Sbjct 672681 TCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAG 672622 Query 80139 CATTGGAATAATACCATTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCCACTGGCAC 80197 ||| |||| || || || || ||| || || || |||| ||| ||| ||| | || | Sbjct 672621 CATGGGAACGATGCCGTTCGA-GTAGCCGTTCGTACCGGCGATGTAGGAGCCAGTCGCGC 672563 Query 80198 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 80257 | || || ||| | ||| || || || || | || || || | ||||| | Sbjct 672562 GGATGTTGTGAATGCTCAAACCGATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCT 672503 Query 80258 TTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAG 80317 | | ||| || |||||||| || || ||| || |||| | | || |||||| | Sbjct 672502 TGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACG 672443 Query 80318 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 80377 | | || | || ||||| || ||||| | || || || ||||| ||||| | Sbjct 672442 AAAGCTGCGGGTGAGGCGTTCCGGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGC 672383 Query 80378 TTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGA---TGAATTC 80434 || |||| || ||||||| ||| | | || || || ||| || || | Sbjct 672382 GCTCGGACATGAGGTTGTACGACTCCAAGACGCGCTCGATGTCG---TGACCGTGGATGC 672326 Query 80435 CTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 80494 | | ||||||||||| | ||||||||| || | ||| ||| |||| | || | Sbjct 672325 CGATGGCGACACGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAA 672266 Query 80495 ACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 80554 |||||| || || | ||||| || ||||| |||||||| ||| || || |||| Sbjct 672265 GCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAACCAAAATCGCGGTCGT 672206 Query 80555 AAATAAT 80561 | ||||| Sbjct 672205 AGATAAT 672199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266779869000