Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq119 129 8e-25
>seq119
Length=1057158
Score = 129 bits (142), Expect = 8e-25
Identities = 405/626 (65%), Gaps = 6/626 (1%)
Strand=Plus/Minus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
|| || | |||||||||||| || ||||| || || | || ||||| | | |
Sbjct 672821 ACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACT 672762
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
||||| || || ||||| ||| || |||||| | | || |||| ||||||||
Sbjct 672761 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGATGTCAGCGTGCCACGGC 672702
Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201
|| | ||| || || | |||| || || ||||| || || || || | ||| | |||
Sbjct 672701 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 672642
Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261
||||| || || || | | ||| |||| || || || || || || || |||| |
Sbjct 672641 GTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGAGTAGCCGTTCGTACCGGCG 672582
Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321
|| ||| ||| | || || || ||| ||| | ||| || || || || | ||
Sbjct 672581 ATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACCGATACCACCGGCGGTCTTG 672522
Query 72322 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 72381
|| || | ||||| || | ||| || |||||||| || || ||| ||| ||||
Sbjct 672521 GAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATC 672462
Query 72382 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 72441
| | || |||||| || | || | || ||||| || ||||| | || ||
Sbjct 672461 GTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTAAAGAGCGTCGGC 672402
Query 72442 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 72501
|| ||||| ||||| | || |||| || ||||||| ||| | | || ||
Sbjct 672401 GAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTCCAAGACGCGCTCGATG 672342
Query 72502 TCCCATTGA---TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACG 72558
|| ||| || || || | ||||||||||| | ||| ||||| || | ||| ||
Sbjct 672341 TCG---TGACCGTGGATGCCGATGGCGACACGCATGAGCATGTGCTGCGGGCGTTCGGCG 672285
Query 72559 ATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 72618
| |||| | || | ||||||||| || | ||||| || ||||| ||||||
Sbjct 672284 ACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTG 672225
Query 72619 TATGAAAAGTCTCGTTCGTAAATAAT 72644
|| ||| || || ||||| |||||
Sbjct 672224 TAACCAAAATCGCGGTCGTAGATAAT 672199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137312421000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |