Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq119 129 8e-25 >seq119 Length=1057158 Score = 129 bits (142), Expect = 8e-25 Identities = 405/626 (65%), Gaps = 6/626 (1%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || | |||||||||||| || ||||| || || | || ||||| | | | Sbjct 672821 ACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACT 672762 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| || || ||||| ||| || |||||| | | || |||| |||||||| Sbjct 672761 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGATGTCAGCGTGCCACGGC 672702 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 || | ||| || || | |||| || || ||||| || || || || | ||| | ||| Sbjct 672701 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 672642 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| || || || | | ||| |||| || || || || || || || |||| | Sbjct 672641 GTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGAGTAGCCGTTCGTACCGGCG 672582 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 || ||| ||| | || || || ||| ||| | ||| || || || || | || Sbjct 672581 ATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACCGATACCACCGGCGGTCTTG 672522 Query 72322 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 72381 || || | ||||| || | ||| || |||||||| || || ||| ||| |||| Sbjct 672521 GAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATC 672462 Query 72382 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 72441 | | || |||||| || | || | || ||||| || ||||| | || || Sbjct 672461 GTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTAAAGAGCGTCGGC 672402 Query 72442 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 72501 || ||||| ||||| | || |||| || ||||||| ||| | | || || Sbjct 672401 GAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTCCAAGACGCGCTCGATG 672342 Query 72502 TCCCATTGA---TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACG 72558 || ||| || || || | ||||||||||| | ||| ||||| || | ||| || Sbjct 672341 TCG---TGACCGTGGATGCCGATGGCGACACGCATGAGCATGTGCTGCGGGCGTTCGGCG 672285 Query 72559 ATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 72618 | |||| | || | ||||||||| || | ||||| || ||||| |||||| Sbjct 672284 ACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTG 672225 Query 72619 TATGAAAAGTCTCGTTCGTAAATAAT 72644 || ||| || || ||||| ||||| Sbjct 672224 TAACCAAAATCGCGGTCGTAGATAAT 672199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137312421000