Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq143 107 3e-18 seq119 105 1e-17 >seq143 Length=1035691 Score = 107 bits (118), Expect = 3e-18 Identities = 174/243 (72%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || |||| | |||||| ||||| |||| ||||| ||||| | ||||||| | || || Sbjct 143980 ATCTGGGCACAGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTG 144039 Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 ||||||||| || |||| ||||| || | | | || ||||| | || || || Sbjct 144040 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 144098 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197 |||| | | ||||| || |||| |||||| || || |||||||| || || | || Sbjct 144099 GCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGGATTGTCAACGAGAACTTGGTCGAGCG 144158 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254 ||||||| ||| | ||| || | |||| ||| |||||||| || ||||||||||| Sbjct 144159 ATTCTCTGGTGAG--GTCCAGTCCGCCGAGG-CTCGATGCTTTTATGGTTTCCAAATCAT 144215 Query 125255 GAT 125257 ||| Sbjct 144216 GAT 144218 >seq119 Length=1057158 Score = 105 bits (116), Expect = 1e-17 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 ||||||||||| ||||||||||| || ||||| | ||||| || | |||||| || Sbjct 674033 ATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTCCGCCGACCGA 674092 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 |||| || |||||||||| |||||| | || | || ||| ||||||| | | | Sbjct 674093 GGTGCCTTCATTGACCAGTCGCAATCGCTAAACATCCAC-TTGTCGAGCCCCACGA-TGG 674150 Query 98157 CGTA--TGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACT 98214 || | |||| ||||| |||||||||| ||||| || || ||||| |||||||||| Sbjct 674151 CGCAACTGACGTCGATGCACTTTTACGGCTGGAAGCGAGGACTGAAGACTGGCATGTACT 674210 Query 98215 A 98215 | Sbjct 674211 A 674211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057115771000