Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq143 107 3e-18
seq119 105 1e-17
>seq143
Length=1035691
Score = 107 bits (118), Expect = 3e-18
Identities = 174/243 (72%), Gaps = 8/243 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||| | |||||| ||||| |||| ||||| ||||| | ||||||| | || ||
Sbjct 143980 ATCTGGGCACAGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTG 144039
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||||||||| || |||| ||||| || | | | || ||||| | || || ||
Sbjct 144040 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 144098
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||| | | ||||| || |||| |||||| || || |||||||| || || | ||
Sbjct 144099 GCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGGATTGTCAACGAGAACTTGGTCGAGCG 144158
Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254
||||||| ||| | ||| || | |||| ||| |||||||| || |||||||||||
Sbjct 144159 ATTCTCTGGTGAG--GTCCAGTCCGCCGAGG-CTCGATGCTTTTATGGTTTCCAAATCAT 144215
Query 125255 GAT 125257
|||
Sbjct 144216 GAT 144218
>seq119
Length=1057158
Score = 105 bits (116), Expect = 1e-17
Identities = 134/181 (74%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096
||||||||||| ||||||||||| || ||||| | ||||| || | |||||| ||
Sbjct 674033 ATCTACAAGACCGTCTGGGAGATCTCGCAAAAGACCATTATCGACTTGTCCGCCGACCGA 674092
Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156
|||| || |||||||||| |||||| | || | || ||| ||||||| | | |
Sbjct 674093 GGTGCCTTCATTGACCAGTCGCAATCGCTAAACATCCAC-TTGTCGAGCCCCACGA-TGG 674150
Query 98157 CGTA--TGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACT 98214
|| | |||| ||||| |||||||||| ||||| || || ||||| ||||||||||
Sbjct 674151 CGCAACTGACGTCGATGCACTTTTACGGCTGGAAGCGAGGACTGAAGACTGGCATGTACT 674210
Query 98215 A 98215
|
Sbjct 674211 A 674211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057115771000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |