Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq91 86.0 1e-11 >seq91 Length=2005964 Score = 86.0 bits (94), Expect = 1e-11 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || | || | || || || ||||| || || || || Sbjct 618777 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 618718 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||||| || || || || || || || || | | ||| || || || Sbjct 618717 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 618658 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508 || || || || || ||||||||||| || || || || || | ||||| | ||| ||| Sbjct 618657 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATC-CGAGGATTC 618599 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || ||||| || || | || || ||||| || ||||| Sbjct 618598 GACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 618548 Score = 86.0 bits (94), Expect = 1e-11 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || | || | || || || ||||| || || || || Sbjct 619917 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 619858 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||||| || || || || || || || || | | ||| || || || Sbjct 619857 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 619798 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508 || || || || || ||||||||||| || || || || || | ||||| | ||| ||| Sbjct 619797 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATC-CGAGGATTC 619739 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || ||||| || || | || || ||||| || ||||| Sbjct 619738 GACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619688 Score = 86.0 bits (94), Expect = 1e-11 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || | || | || || || ||||| || || || || Sbjct 620145 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 620086 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||||| || || || || || || || || | | ||| || || || Sbjct 620085 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 620026 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508 || || || || || ||||||||||| || || || || || | ||||| | ||| ||| Sbjct 620025 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATC-CGAGGATTC 619967 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || ||||| || || | || || ||||| || ||||| Sbjct 619966 GACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619916 Score = 86.0 bits (94), Expect = 1e-11 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || | || | || || || ||||| || || || || Sbjct 620601 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 620542 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||||| || || || || || || || || | | ||| || || || Sbjct 620541 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 620482 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508 || || || || || ||||||||||| || || || || || | ||||| | ||| ||| Sbjct 620481 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATC-CGAGGATTC 620423 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || ||||| || || | || || ||||| || ||||| Sbjct 620422 GACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 620372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395080734300