Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq91 86.0 1e-11
>seq91
Length=2005964
Score = 86.0 bits (94), Expect = 1e-11
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | ||| || | || | || || || ||||| || || || ||
Sbjct 618777 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 618718
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | ||||| || || || || || || || || | | ||| || || ||
Sbjct 618717 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 618658
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508
|| || || || || ||||||||||| || || || || || | ||||| | ||| |||
Sbjct 618657 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATC-CGAGGATTC 618599
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| || || | || || ||||| || |||||
Sbjct 618598 GACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 618548
Score = 86.0 bits (94), Expect = 1e-11
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | ||| || | || | || || || ||||| || || || ||
Sbjct 619917 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 619858
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | ||||| || || || || || || || || | | ||| || || ||
Sbjct 619857 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 619798
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508
|| || || || || ||||||||||| || || || || || | ||||| | ||| |||
Sbjct 619797 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATC-CGAGGATTC 619739
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| || || | || || ||||| || |||||
Sbjct 619738 GACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619688
Score = 86.0 bits (94), Expect = 1e-11
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | ||| || | || | || || || ||||| || || || ||
Sbjct 620145 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 620086
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | ||||| || || || || || || || || | | ||| || || ||
Sbjct 620085 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 620026
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508
|| || || || || ||||||||||| || || || || || | ||||| | ||| |||
Sbjct 620025 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATC-CGAGGATTC 619967
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| || || | || || ||||| || |||||
Sbjct 619966 GACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619916
Score = 86.0 bits (94), Expect = 1e-11
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | ||| || | || | || || || ||||| || || || ||
Sbjct 620601 ATACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 620542
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | ||||| || || || || || || || || | | ||| || || ||
Sbjct 620541 GCGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGG 620482
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTC 104508
|| || || || || ||||||||||| || || || || || | ||||| | ||| |||
Sbjct 620481 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATC-CGAGGATTC 620423
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| ||||| || ||||| || || | || || ||||| || |||||
Sbjct 620422 GACCTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 620372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395080734300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |