Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq119 149 8e-31 >seq119 Length=1057158 Score = 149 bits (164), Expect = 8e-31 Identities = 423/646 (65%), Gaps = 8/646 (1%) Strand=Plus/Minus Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63256 |||||| ||| | ||| || || | |||||||||||| || ||||| || || | || Sbjct 672840 CCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAA 672781 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 ||||| | | | |||||| || || ||||| ||| || |||||| | | Sbjct 672780 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 672721 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 || |||| |||||||| || | ||| || || | |||| || || ||||| || || Sbjct 672720 GATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 672661 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 || || | ||| | |||||||| || || || | | ||| |||| || ||||| || Sbjct 672660 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGA 672601 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496 || || ||||||| ||| ||| ||| | || || || || ||| | ||| Sbjct 672600 GTAGCCGTTCGTACCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACC 672541 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || || || | || || || | ||||| || | |||||| ||||| || || Sbjct 672540 GATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTC 672481 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616 || ||| || |||| | | || |||||| || | || | || ||||| Sbjct 672480 AATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCC 672421 Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676 || ||||| | || || || ||||| ||||| | || || | || ||||||| Sbjct 672420 GGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGA 672361 Query 63677 CTCAATAGCTGAG-TCTATATCCCATTGA---TGAATTCCTACTGCGACACGCATTAACA 63732 ||| | || | | || || || ||| || || || | ||||||||||| | || Sbjct 672360 CTCCA-AGACGCGCTCGATGTC---GTGACCGTGGATGCCGATGGCGACACGCATGAGCA 672305 Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63792 ||||||| || | ||| ||| |||| || || | ||||||||| || | | Sbjct 672304 TGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCG 672245 Query 63793 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 |||| || ||||| |||||||| ||| || || ||||| ||||| Sbjct 672244 TTTTGAAGCCAAAGTAGTTGTAACCAAAATCGCGGTCGTAGATAAT 672199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945447961000