Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq119 149 8e-31
>seq119
Length=1057158
Score = 149 bits (164), Expect = 8e-31
Identities = 423/646 (65%), Gaps = 8/646 (1%)
Strand=Plus/Minus
Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63256
|||||| ||| | ||| || || | |||||||||||| || ||||| || || | ||
Sbjct 672840 CCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAA 672781
Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316
||||| | | | |||||| || || ||||| ||| || |||||| | |
Sbjct 672780 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 672721
Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376
|| |||| |||||||| || | ||| || || | |||| || || ||||| || ||
Sbjct 672720 GATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 672661
Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436
|| || | ||| | |||||||| || || || | | ||| |||| || ||||| ||
Sbjct 672660 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGA 672601
Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496
|| || ||||||| ||| ||| ||| | || || || || ||| | |||
Sbjct 672600 GTAGCCGTTCGTACCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACC 672541
Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556
|| || || || | || || || | ||||| || | |||||| ||||| || ||
Sbjct 672540 GATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTC 672481
Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616
|| ||| || |||| | | || |||||| || | || | || |||||
Sbjct 672480 AATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCC 672421
Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676
|| ||||| | || || || ||||| ||||| | || || | || |||||||
Sbjct 672420 GGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGA 672361
Query 63677 CTCAATAGCTGAG-TCTATATCCCATTGA---TGAATTCCTACTGCGACACGCATTAACA 63732
||| | || | | || || || ||| || || || | ||||||||||| | ||
Sbjct 672360 CTCCA-AGACGCGCTCGATGTC---GTGACCGTGGATGCCGATGGCGACACGCATGAGCA 672305
Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63792
||||||| || | ||| ||| |||| || || | ||||||||| || | |
Sbjct 672304 TGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCG 672245
Query 63793 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
|||| || ||||| |||||||| ||| || || ||||| |||||
Sbjct 672244 TTTTGAAGCCAAAGTAGTTGTAACCAAAATCGCGGTCGTAGATAAT 672199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622945447961000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |