Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq119 210 6e-49 >seq119 Length=1057158 Score = 210 bits (232), Expect = 6e-49 Identities = 577/874 (66%), Gaps = 20/874 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 |||||||||||||| ||| | |||||||| || || || ||||| | | || | || Sbjct 672289 GAACGCCCGCAGCACATGCTCATGCGTGTCGCCATCGGCATCCACGGTCACGACATCGAG 672348 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAA 363565 || | || | || || || | || | | | || || || |||||| |||| | Sbjct 672349 CGCGTCTTGGAGTCGTACAACCTCAT--GTCCGAGCGCTACTTTACCCACGCCTCGCCGA 672406 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | || || ||||| | | | || ||| | || || || || || | | |||| Sbjct 672407 CGCTCTTTAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGA 672466 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||||||||| || || || |||| ||||| || |||| ||| || || |||||||||| Sbjct 672467 AGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACTTGCGCGCTCATTTCCAAGA 672526 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744 || || || || ||| | || ||||| | || || || | | ||||| | Sbjct 672527 CCGCCGGTGGTATCGGTTTGAGCATTCACAACATCCGCGCGACTGG-CTCCTACATCGCC 672585 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 || || || |||||||| || | ||||||||||| ||||| | |||| || ||| Sbjct 672586 GGTACGAACGGCTACTCGAACGGCATCGTTCCCATGCTCCGTGTCTACAACAACACCGCG 672645 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | ||||||||||| ||||| ||||| || || || || || || |||||||| Sbjct 672646 CGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCG 672705 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 || || || || || ||||| || || || || || ||| || || |||||| | Sbjct 672706 TGGCACGCTGACATCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTC 672765 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 || || |||||||| |||| ||| || ||| | | || | |||||| |||| || ||| Sbjct 672766 CGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTTATGGAGCGTGTCGAG 672825 Query 363985 ---GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041 || ||| || ||| | ||||| ||||| |||| || || || ||| || Sbjct 672826 GCCGCCGGTGAG---TGGCCTCTCTTCTGCCCTGCCGAAGCCCCCGGCCTCCACGAAGTC 672882 Query 364042 TGGGGTGACGACTATGTT----GCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 | |||||| | ||| || || | ||| || || ||| |||||| || Sbjct 672883 T---ATGACGAAGA-GTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAA 672938 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 | ||| || ||||| || ||||| |||| || || | | | ||| | || || || Sbjct 672939 GAGGACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTCCAAGCCCAGGTCGAAACCGG 672998 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 | || | ||| | ||||| || | ||| || || ||||| || ||||||| Sbjct 672999 CAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCTAACCAAAAGAACCTTGG 673058 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || || || ||||| || |||||||| ||||| ||| | || ||||| ||| Sbjct 673059 CACGATCAAGTCCTCGAACCTGTGCACCGAGATCATTGAGTACTCGGCGCCCGATGAGTG 673118 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 ||||| || || | || ||||||||| | ||| Sbjct 673119 CGCCGTCTGCAATTTGGCCTCGATCGCGTTGCCG 673152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349842675950