Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq119 143 3e-29 >seq119 Length=1057158 Score = 143 bits (158), Expect = 3e-29 Identities = 424/647 (66%), Gaps = 10/647 (2%) Strand=Plus/Minus Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 |||||| ||| | ||| || || | |||||||||||| || ||||| || || | || Sbjct 672840 CCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAA 672781 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||| | | | |||||| || || ||||| ||| || |||||| | | Sbjct 672780 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 672721 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 || |||| |||||||| || | ||| || || | |||| || || ||||| || || Sbjct 672720 GATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 672661 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 || || | ||| | |||||||| || || || | | ||| |||| || || || || Sbjct 672660 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGA 672601 Query 63292 TGTA-CCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGAC 63350 ||| || || || || | ||| ||| ||| | || || || || ||| | || Sbjct 672600 -GTAGCCGTTCGTACCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAAC 672542 Query 63351 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 63410 | || || || || | || || || | ||||| || | ||| || |||||||| | Sbjct 672541 CGATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTT 672482 Query 63411 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63470 | || ||| ||| |||| | | || |||||| || | || | || |||| Sbjct 672481 CAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTC 672422 Query 63471 CCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACG 63530 | || ||||| | || || || ||||| ||||| | || || | || ||||||| Sbjct 672421 CGGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACG 672362 Query 63531 TCTCAATAGCTGAG-TCTATATCCCATTGA---TGAATTCCTACTGCGACACGCATTAAC 63586 ||| | || | | || || || ||| || || || | ||||||||||| | | Sbjct 672361 ACTCCA-AGACGCGCTCGATGTC---GTGACCGTGGATGCCGATGGCGACACGCATGAGC 672306 Query 63587 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63646 |||||||| || | ||| ||| |||| || || | ||||||||| || | Sbjct 672305 ATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGC 672246 Query 63647 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693 ||||| || ||||| |||||||| ||| || || ||||| ||||| Sbjct 672245 GTTTTGAAGCCAAAGTAGTTGTAACCAAAATCGCGGTCGTAGATAAT 672199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630217910000