Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq100 123 5e-23
seq79 93.3 9e-14
seq63 87.8 4e-12
>seq100
Length=649876
Score = 123 bits (136), Expect = 5e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229
||| || |||| ||||| ||||| ||||| || ||||| ||||| || |||| ||||||
Sbjct 357926 GGTATCGTTGGCCCCAACGGTGCCGGTAAATCGACCCTGATCAAGCTCTTGACGGGCGAG 357867
Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289
||| | || || || ||| |||||| || ||| |||| | || ||||| |||
Sbjct 357866 ACCGTGCCCGACGAAGGCAAGGTTGAGAAGCACCCTAACTTGCGTGTCGCGTACGTGGCT 357807
Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349
|| ||||| ||||||||||||||| | ||||| || | ||| | | || ||||| |||
Sbjct 357806 CAACACGCGTTCCACCACATCGAGGAACACCTTGAGAAGACGGCGATGCAGTACATCCAG 357747
Query 280350 TGGCGCTA 280357
||||| ||
Sbjct 357746 TGGCGTTA 357739
>seq79
Length=1382791
Score = 93.3 bits (102), Expect = 9e-14
Identities = 234/356 (66%), Gaps = 0/356 (0%)
Strand=Plus/Minus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577
|| || ||| |||||||| | || || |||||| | || | |||||||||||||
Sbjct 732753 GATTTTATCAACAAGGAGTTGATCCTCTTCTCGATGGCCGACAACGTGCGTTCTATTCCC 732694
Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637
|| | ||||| |||| || || || ||| || | || | ||||||||
Sbjct 732693 TCTGTCATTGATGGGTTCAAACCGGGTCAACGCAAGGTCTTGTTCGGTTGCTTCAAGCGC 732634
Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697
|| ||| ||||| || ||||||| || || ||||| || |||| || |
Sbjct 732633 AAGCTGACGCAAGAGATCAAGGTCGGACAATTGGGCGGTTACGTCGCCGAGCACTCGGCG 732574
Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757
|||||||||||||| |||| |||| || |||| | ||| |||| || | | ||
Sbjct 732573 TACCATCACGGTGAAATGAGTTTGCAAGGCACCATCATCGGCCTGGCGCAACAGTTCGTC 732514
Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGT 218817
|| |||||| | ||| | || ||| |||||||| ||||| ||||||| |||
Sbjct 732513 GGGTCCAACAACCTCAACGTTCTCGACCCGAACGGTCAATTTGGCACTCGTCTGCAAGGT 732454
Query 218818 GGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873
|| || || ||||| || | || ||||| || || | || || | |||||
Sbjct 732453 GGTAAAGACGCGGCTTCGGCTCGTTACATCTTCACGAACGTATCATCCATCACGCG 732398
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||| ||||||||||||||||||||| | ||||||||||| || |||| ||||||||||
Sbjct 564852 GCCTGGTTAGCTCAGTCGGTAGAGCACCTGACTCTTAATCAGGTTGTCGCGGGTTCGAGC 564793
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 564792 CCCGCATCGGGC 564781
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||| ||||||||||||||||||||| | ||||||||||| || |||| ||||||||||
Sbjct 581107 GCCTGGTTAGCTCAGTCGGTAGAGCACCTGACTCTTAATCAGGTTGTCGCGGGTTCGAGC 581166
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 581167 CCCGCATCGGGC 581178
Score = 87.8 bits (96), Expect = 4e-12
Identities = 249/373 (67%), Gaps = 10/373 (3%)
Strand=Plus/Minus
Query 217744 CTCAAGAAGACCGATGGCGTCAAGAAGACTCGTCTCACGGGCATCAAGAAGCTCACGGAC 217803
||||||||||| || || |||| | ||| ||||||| || |||||| ||
Sbjct 733530 CTCAAGAAGACGGACGGACACAAGCGATCGCGTATCACGGGTCTCGTTAAGCTCGAAGAT 733471
Query 217804 GCTGCAT-GGGCTGGCACCAAAAACTCTGGTC--TCTGCACTCTCATCCTGACAGAGGGA 217860
|| | || ||||| || | || | |||| ||||| |||||| |||| || |||
Sbjct 733470 GC-GAATAACGCTGGTACGAGGAA--CGGGTCCAAGTGCACGCTCATCTTGACCGAAGGA 733414
Query 217861 GACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGCCGTGGTGGGTCGTGAAAGGTATGGT 217920
|| || || |||| || | | ||||| || || || ||||| || | ||||||
Sbjct 733413 GATTCCGCCAAGGCGCTTGCCGTCTCGGGTCTGGCTGTCGTCGGTCGAGACAACTATGGT 733354
Query 217921 ATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCGCGATGCCTCGGTTTCAAGCATTGCT 217980
||||||| | || || ||| |||||||||| || || || ||| |||| | ||
Sbjct 733353 GTCTTCCCTTTGCGAGGAAAGTTGCTCAACGTACGTGAAGCGGCGG-GCAAAGCCCTTCT 733295
Query 217981 -GCAAATGCAGAGATTGCCGCCATCAAGCAAATCCTGGGTCTTCAGGTTGGAAAGACTTA 218039
| ||||| |||||| || |||||||| ||| ||||||| ||| || || |||
Sbjct 733294 CGACAATGCCGAGATTCAAGCGATCAAGCAGATCTTGGGTCTGCAGCAGGGCAAAGTTTA 733235
Query 218040 CAAGGATG-CGTCATCTCTGCGTTATGGCTCTGTCATGCTTATGACTGATGCTGATGTTG 218098
|| || | || | || || ||||| ||| ||||| | ||| | ||| ||| |
Sbjct 733234 CACCGACGTCGAC-TCGCTCCGTTACGGCAAGCTCATGATCATGGCCGATCAAGATCACG 733176
Query 218099 ACGGGTCCCACAT 218111
| || || |||||
Sbjct 733175 ATGGATCGCACAT 733163
>seq63
Length=964923
Score = 87.8 bits (96), Expect = 4e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || ||||| ||||| |||||||||||||| || | | || ||||| || |
Sbjct 908688 GGCTCGCTGTCCGGTGGATGGAAGATGAAGCTCGCGTTGGCGCGTGCCATCCTGTTCGAG 908747
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| | || |||| || ||||| || |||||| ||||| ||||| ||||||
Sbjct 908748 GCCGATATTCTCTTGCTCGACGAGCCGACGAACCACTTGGACGTGCTTAACGTCGCCTGG 908807
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | | ||||| || |||| || | ||| |||| ||||| ||||||||
Sbjct 908808 CTCGAGAATTACCTCACGTCGCTGACGACGTGCACGTCCATCATCGTCTCGCACGACTCG 908867
Query 279879 GGCTTCCT 279886
||||||||
Sbjct 908868 GGCTTCCT 908875
Score = 87.8 bits (96), Expect = 4e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || ||||| ||||| |||||||||||||| || | | || ||||| || |
Sbjct 915141 GGCTCGCTGTCCGGTGGATGGAAGATGAAGCTCGCGTTGGCGCGTGCCATCCTGTTCGAG 915082
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| | || |||| || ||||| || |||||| ||||| ||||| ||||||
Sbjct 915081 GCCGATATTCTCTTGCTCGACGAGCCGACGAACCACTTGGACGTGCTTAACGTCGCCTGG 915022
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | | ||||| || |||| || | ||| |||| ||||| ||||||||
Sbjct 915021 CTCGAGAATTACCTCACGTCGCTGACGACGTGCACGTCCATCATCGTCTCGCACGACTCG 914962
Query 279879 GGCTTCCT 279886
||||||||
Sbjct 914961 GGCTTCCT 914954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027833836939225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |