Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq119 316 4e-81
seq143 120 6e-22
>seq119
Length=1057158
Score = 316 bits (350), Expect = 4e-81
Identities = 812/1222 (66%), Gaps = 32/1222 (3%)
Strand=Plus/Minus
Query 244397 GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTG 244456
||||||| |||||||||||||||||| |||||| | | ||| |||| | | |
Sbjct 673409 GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCCTCGGGCGAATCG 673350
Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516
|| || || ||| |||||| ||||||| || || ||||| ||||||||||||||
Sbjct 673349 AACGGCATCGCCAAGGCCATGAACGCGTCGGCAAGACCTTGCACTCCGATGCCGATGGGG 673290
Query 244517 CTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACC 244576
| ||| || ||| || | || ||| ||||| || |||| ||| ||| |
Sbjct 673289 CGGTGGCGGAGGTTAGAATTCTGTGCCTCGATGACGGGATAGTAGTTAACGTTGATGATG 673230
Query 244577 TTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCG 244636
||| | |||| | || | | |||| ||| || | || || |||||| ||
Sbjct 673229 CGGTTCAAGTTGAAAGCGACGACCTTGGCGACCTCGTGCAACTTCTTGAAATCGTACACG 673170
Query 244637 TAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTG 244696
| | || || ||| ||| ||| || | ||| ||||| |||
Sbjct 673169 CCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCCAAATTG 673128
Query 244697 CAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCAC 244756
|||||||| ||| || | | ||||| | ||||||||||| ||||| | ||
Sbjct 673127 CAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCGGTGCACAGGTTCGAGGAC 673068
Query 244757 TTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816
||||| ||||| |||| || || || || || ||| |||||||||||||||||||
Sbjct 673067 TTGATCGTGCCAAGGTTCTTTTGGTTAGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATG 673008
Query 244817 AAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTT 244875
|| || ||||| |||| |||||| ||| | ||| || ||| || | ||
Sbjct 673007 AACGGGTTGCCGGTTTCGACCTGGGCTTGGAGAATCGC-GTACCAAAGCTTTTGCGCGGG 672949
Query 244876 GACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGG 244935
|| |||||| || ||||| ||||| | ||||||| ||||||
Sbjct 672948 GATCGTCCTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTC 672889
Query 244936 GCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCC 244995
| | |||| |||| ||||||||| || ||||| | |||| |||||| ||| |
Sbjct 672888 GTCATAGACTTCGTGGAGGCCGGGGGCTTCGGCAGGGCAGAAGAGAGGCCACTCACCGGC 672829
Query 244996 GTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGT 245055
| ||| ||| | || ||| ||||| |||||||||||||| || |||||| || | |
Sbjct 672828 GGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGC 672769
Query 245056 CCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTG 245115
| || ||| ||| |||||| | || |||| || || |||| ||| ||||
Sbjct 672768 GCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGATGTCAGCGTG 672709
Query 245116 CCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCAT 245175
||| ||||| | ||||| |||| ||| ||||| ||||||||||| || ||||| ||
Sbjct 672708 CCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTA 672649
Query 245176 CCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGT 245235
| | || |||| ||| || || | || || |||||||| |||| |||||| ||
Sbjct 672648 GCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGAGTAGCCGTTCGT 672589
Query 245236 GCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGC 245295
|| |||||||| ||| | | | || |||| ||| || || | || |||||
Sbjct 672588 ACCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACCGATACCACCGGC 672529
Query 245296 GTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGA 245355
| |||||| ||||| ||||| |||||| ||||| ||||| || || ||
Sbjct 672528 GGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAATCGTC 672469
Query 245356 CTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAG 245415
|||||| ||| ||| || ||||| || ||||| || | || | | | ||| || ||
Sbjct 672468 CTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTAAAGAG 672409
Query 245416 AGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGAGCAGA- 245473
|| || ||||||||||||||||| |||| || | || ||||| || | |||
Sbjct 672408 CGTCGGCGAGGCGTGGGTAAAGTAGC-GCTCGGACATGAGGTTGTACGACTCCA--AGAC 672352
Query 245474 GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG-GGGCG 245531
||| ||||||| || |||||||| | |||| | |||||| ||||||| |||||
Sbjct 672351 GCGCTCGATGTCGTGACCGTGGATGCCGATGGCGACACGCATGAGCATGTGCTGCGGGCG 672292
Query 245532 TCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCC 245589
| ||| | | || | ||| | |||| |||||||||||||||||| ||||| ||
Sbjct 672291 T-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCC 672235
Query 245590 AAAGTACGAGTAGCCAAAGTCG 245611
|||||| ||| ||||| |||
Sbjct 672234 AAAGTAGTTGTAACCAAAATCG 672213
>seq143
Length=1035691
Score = 120 bits (132), Expect = 6e-22
Identities = 188/263 (71%), Gaps = 11/263 (4%)
Strand=Plus/Plus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | || || |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 144705 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 144764
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| |||||| | |||||||| || || | |||||||| ||||| |||||
Sbjct 144765 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTTTTGTTC 144824
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922
|| ||||||| || ||| |||| || ||| | |||||||| ||||||
Sbjct 144825 TC---CCACCTCGAGC-GAAGACCTCACCCAGATACCGTCGCGCTCATCATCAAGGAGGC 144880
Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC---CGTGTCCCTGGTCGGCAT 42979
||| || ||||||||||| ||| | || || | || || || || || |||| ||
Sbjct 144881 CGTCGAAATCGAGAAGGAATTCTTGACCGAGGCTCTTCCTTGCG-GT--TTGATCGGTAT 144937
Query 42980 GAACCACGACCTCATGTGCAAGT 43002
||| | | ||||||||| |||
Sbjct 144938 GAATGCCAAGCTCATGTGCCAGT 144960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944336544046000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |