Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq91 96.9 3e-15 >seq91 Length=2005964 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || || ||||||| || ||||| ||||||||| ||||||||||| || Sbjct 619231 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 619172 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| || | |||||||| || || |||| |||||||| || || Sbjct 619171 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 619112 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | || ||| |||||| |||||| ||| | | | |||| | |||||| Sbjct 619111 AATGCCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 619052 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| ||| || || || ||||| || || || |||||||||||||| Sbjct 619051 CTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 619004 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || || ||||||| || ||||| ||||||||| ||||||||||| || Sbjct 618775 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 618716 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| || | |||||||| || || |||| |||||||| || || Sbjct 618715 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 618656 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | || ||| |||||| ||| || ||| | | | |||| | |||||| Sbjct 618655 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 618596 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| || || || || ||||| | || || |||||||||||||| Sbjct 618595 CTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 618548 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || || ||||||| || ||||| ||||||||| ||||||||||| || Sbjct 619459 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 619400 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| || | |||||||| || || |||| |||||||| || || Sbjct 619399 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 619340 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | || ||| |||||| ||| || ||| | | | |||| | |||||| Sbjct 619339 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 619280 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| || || || || ||||| | || || |||||||||||||| Sbjct 619279 CTCGAGGGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619232 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || || ||||||| || ||||| ||||||||| ||||||||||| || Sbjct 619915 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 619856 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| || | |||||||| || || |||| |||||||| || || Sbjct 619855 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 619796 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | || ||| |||||| ||| || ||| | | | |||| | |||||| Sbjct 619795 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 619736 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| || || || || ||||| | || || |||||||||||||| Sbjct 619735 CTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619688 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || || ||||||| || ||||| ||||||||| ||||||||||| || Sbjct 620143 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 620084 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| || | |||||||| || || |||| |||||||| || || Sbjct 620083 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 620024 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | || ||| |||||| ||| || ||| | | | |||| | |||||| Sbjct 620023 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 619964 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| || || || || ||||| | || || |||||||||||||| Sbjct 619963 CTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619916 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || || ||||||| || ||||| ||||||||| ||||||||||| || Sbjct 620599 ACCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 620540 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| || | |||||||| || || |||| |||||||| || || Sbjct 620539 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 620480 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | || ||| |||||| ||| || ||| | | | |||| | |||||| Sbjct 620479 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGAC 620420 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| || || || || ||||| | || || |||||||||||||| Sbjct 620419 CTCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 620372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061311180450