Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq197 107 4e-18 seq100 86.0 1e-11 >seq197 Length=690576 Score = 107 bits (118), Expect = 4e-18 Identities = 258/385 (67%), Gaps = 8/385 (2%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 |||||| || | || |||||||| || || || || | ||||| | || | || Sbjct 72561 CCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAGACGAC 72620 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 || || || ||||| |||||||| ||||| ||||||||||| | |||||| || Sbjct 72621 GCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTGGATCGTCAA 72680 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || ||||| |||||||| ||||||| | |||||| || | ||||| ||| ||| Sbjct 72681 GAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCAC--GAG 72738 Query 68585 TCCCAAC--AGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATT 68642 |||| | | || | ||||| || | |||||| || | ||||| | | | Sbjct 72739 TCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAAATCTCGCGAGCTGTCGCCGAGA-T 72797 Query 68643 TTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGG 68700 || | | ||| | | | ||| | || ||||| || | || ||||| | || |||| Sbjct 72798 CTCGCTCG-GTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGACTGGG 72856 Query 68701 GATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATG 68760 || | || || ||||| || | |||||| |||||||||| ||||| || || || | Sbjct 72857 GACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGACG 72916 Query 68761 ACTATGTGATTGCAACAGGGAAAAC 68785 ||| ||| | || || || |||| Sbjct 72917 ACTTTGTCCTCGCGACGGGCGAAAC 72941 >seq100 Length=649876 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 333336 TAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 333395 |||||||| ||||| ||||| | | ||| | ||||| || ||||||||||||||||| Sbjct 357739 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCAAGGTGTTCCTCGATGTGGTGGAAC 357798 Query 333396 GCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 333437 || || || |||||||| || | ||||| || || |||||| Sbjct 357799 GCGTGTTGAGCCACGTACGCGACACGCAAGTTAGGGTGCTTC 357840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876820603750