Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq119 239 4e-58 >seq119 Length=1057158 Score = 239 bits (264), Expect = 4e-58 Identities = 418/607 (69%), Gaps = 6/607 (1%) Strand=Plus/Plus Query 93717 TTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAG 93776 |||| | ||||||| ||||||||| || ||| || ||| | || || || |||| Sbjct 672222 TTACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAA 672281 Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836 ||| |||| || ||||| || |||| ||||| ||||||||||| || ||||| ||||| Sbjct 672282 GGTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCATCGGCATCCACGGTCACGA 672341 Query 93837 CATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGC 93893 ||| | || ||| | | | || |||| || | | || |||| || Sbjct 672342 CATCGAGCGCGTCTTGGAGTCGTACAACCTCATGTCCGA---GCGCTACTTTACCCACGC 672398 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | | ||||| || || ||||| || || || || ||| | || || ||||||||| | Sbjct 672399 CTCGCCGACGCTCTTTAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGT 672458 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 |||| |||| ||| || || || || | ||||| |||||| || ||| ||| Sbjct 672459 CACGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACTTGCGCGCTCAT 672518 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 || || ||| || || ||||| | || | ||| || | || || | || ||||| Sbjct 672519 TTCCAAGACCGCCGGTGGTATCGGTTTGAGCATTCACAACATCCGCGCGACTGGCTCCTA 672578 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 |||| |||||| || ||| ||| |||||| |||| || |||||||| |||| |||||| Sbjct 672579 CATCGCCGGTACGAACGGCTACTCGAACGGCATCGTTCCCATGCTCCGTGTCTACAACAA 672638 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | ||||||||||| ||||| ||||| | | | || | |||||| |||| || Sbjct 672639 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 672698 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||| |||||||| ||| | | ||| | ||||| || |||||||||||||| || Sbjct 672699 CGAGCCGTGGCACGCTGACATCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGA 672758 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 | | || | || ||||||| || |||||| | || || || |||||| | || Sbjct 672759 GGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCTTTATGGAGCG 672818 Query 94314 CGTCGAG 94320 |||||| Sbjct 672819 TGTCGAG 672825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721808591000