Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq90 107 2e-18 seq77 96.9 3e-15 seq143 87.8 2e-12 >seq90 Length=1083821 Score = 107 bits (118), Expect = 2e-18 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | || | || || || | | | ||||||||||| |||||||||||| Sbjct 178237 GCCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGC 178178 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||||| || || |||| |||| ||||| || ||||| || || Sbjct 178177 CAAGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGG 178118 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || ||||| ||||| || | || ||||| | ||| || | ||||||| |||||| Sbjct 178117 GATGCCTTCCTTGTC-TTGGATCTTGGTTTTGACGTTG-TCGATCGTGTCGGACGACTCG 178060 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 ||||||| || | ||| || || || || || || || || || ||| ||| Sbjct 178059 ACCTCGAGGGTGATCGTCTTGCCCGTAAGTGTCTTGACGAAGATTTGCCTGG 178008 >seq77 Length=440787 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || || || | | | ||||||||||| |||||||||||| | Sbjct 313166 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 313107 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || || |||| | |||| ||||| || ||||| || || Sbjct 313106 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 313047 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | || |||| |||||| ||| Sbjct 313046 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACC 312987 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613 |||| || | || || || || || || || ||||| || |||| Sbjct 312986 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 312941 >seq143 Length=1035691 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 52698 TACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGC-AGCCAAAGTACTTCAA 52756 |||||||||||||| || || || ||||||| | || |||| | || ||| || || Sbjct 145036 TACATCGAGTTTGTCGCCGACCGCTTGTTGGT-CGCCTTGGGCAACCCCAAGGTCTGGAA 145094 Query 52757 CGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTT 52816 ||| || || || || |||||||||| || ||||| ||||||||||| ||||| || Sbjct 145095 CGCCGAGAACCCCTTCGATTTTATGAACATGATCTCGCTCGAGGGCAAGACAAACTTCTT 145154 Query 52817 CGAGAAGCGAGT 52828 |||||||| || Sbjct 145155 TGAGAAGCGTGT 145166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261004262000