Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq91 96.9 2e-15 >seq91 Length=2005964 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 619230 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 619171 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 619170 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 619111 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||||||| || || | || || ||||| ||| || Sbjct 619110 ATGCCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 619051 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || ||||| || || ||||| ||||||||| Sbjct 619050 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 619003 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 619458 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 619399 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 619398 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 619339 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || ||||| ||| || Sbjct 619338 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 619279 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| || || || || |||| || || ||||| ||||||||| Sbjct 619278 TCGAGGGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 619231 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 618318 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 618259 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 618258 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 618199 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || ||| || || | || || || || ||| || Sbjct 618198 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 618139 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||||| || || || ||||| || || |||||||||||||| Sbjct 618138 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCAT 618092 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 618774 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 618715 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 618714 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 618655 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || ||||| ||| || Sbjct 618654 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 618595 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || || || |||| || || ||||| ||||||||| Sbjct 618594 TCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 618547 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 619002 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 618943 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 618942 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 618883 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || ||| || || | || || || || ||| || Sbjct 618882 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 618823 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || ||||| || || ||||| ||||||||| Sbjct 618822 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 618775 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 619686 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 619627 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 619626 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 619567 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || ||| || || | || || || || ||| || Sbjct 619566 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 619507 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || ||||| || || ||||| ||||||||| Sbjct 619506 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 619459 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 619914 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 619855 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 619854 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 619795 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || ||||| ||| || Sbjct 619794 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 619735 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || || || |||| || || ||||| ||||||||| Sbjct 619734 TCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 619687 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 620142 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 620083 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 620082 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 620023 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || ||||| ||| || Sbjct 620022 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 619963 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || || || |||| || || ||||| ||||||||| Sbjct 619962 TCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 619915 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 620370 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 620311 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 620310 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 620251 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || ||| || || | || || || || ||| || Sbjct 620250 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACC 620191 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||||| || || || ||||| || || ||||| ||||||||| Sbjct 620190 TCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCATA 620143 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || || || || || || || |||||||||||| | Sbjct 620598 CCACCTCGGAGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 620539 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||| ||| | ||||| ||||| |||||| ||| Sbjct 620538 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGA 620479 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| ||| ||| || || | || || ||||| ||| || Sbjct 620478 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACC 620419 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || || || |||| || || ||||| ||||||||| Sbjct 620418 TCGAGTGTGATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCATA 620371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391019964125