Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq119 104 4e-17 >seq119 Length=1057158 Score = 104 bits (114), Expect = 4e-17 Identities = 166/229 (72%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 203837 GTCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACA 203894 |||||| || || ||||||| || || ||||| ||| || | | || ||||||| Sbjct 674263 GTCTTGGTCGACGGTGAACTTGATCGCACCGACGGC-GGCGCGCGTGCGCAAGTAGTACA 674205 Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CG 203953 |||| ||||| || || || ||| ||||| | |||||| || | ||||| || || Sbjct 674204 TGCCAGTCTTCAGTCCTCGCTTCCAGCCGTAAAAGTGCATCGACGTCAGTTGCGCCATCG 674145 Query 203954 TTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATC 204012 | ||| ||| | | ||| ||||| || || || ||||| ||||| ||| || || || Sbjct 674144 TGGGGCTCGACAA-GTGGATGTTTAGCGATTGCGACTGGTCAATGAA-GGCACCTCGGTC 674087 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 |||| || | |||||||||||| ||||| |||||||| || |||||| Sbjct 674086 GGCGGACAAGTCGATAATGGTCTTTTGCGAGATCTCCCAGACGGTCTTG 674038 Score = 87.8 bits (96), Expect = 3e-12 Identities = 342/529 (65%), Gaps = 14/529 (3%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 ||||||||| || ||| |||||| || | | || |||||||| || | | | | || Sbjct 672816 CTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTC 672757 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | |||||| || || | ||||| |||||||||||||| | Sbjct 672756 CTTGCCGTGGTTCTTGCGAAGGTCCAGG-AACTCGAAGATGTCAGCGTGCCACGGCTCGA 672698 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 672697 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 672638 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || || ||||| || || | ||||| | | |||||||| | | |||| Sbjct 672637 TGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGAGTAGCCGTTCGTACCGGCGATGT 672578 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| ||| | || || || || | ||||| | Sbjct 672577 AGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACCGATACCACCGGCGGTCTTGGAAA 672518 Query 205464 TCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||| | ||||| || ||| |||||||||| | || ||||||||| || || Sbjct 672517 TGAGCGCGCAAGTCTTG-AGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTG 672459 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 ||||| | || || | |||| || || || || |||| |||||||| || Sbjct 672458 ACCAGGAAACAGGACGAAAGCTGCGGGTGAG-GCGTTCCGGCGTTAAAGAGCGTCGGCGA 672400 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCA 205637 ||||||| | ||| | ||||| ||| |||| | ||||| |||| ||| | Sbjct 672399 GGCGTGGGTAAAG----TAGCGCTCGGACATGAGGTTGTACGACTCCAAGACGCGCTCGA 672344 Query 205638 GATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 ||| ||||| || || ||||||| | ||||| | ||| || || Sbjct 672343 TGTCGTGACCGTGGATGCCGATGGCGACACGCATGAGCATGTGCTGCGG 672295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152963626000