Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq74 342 7e-89 seq83 159 4e-34 seq107 152 7e-32 seq109 113 6e-20 seq197 105 8e-18 seq79 89.7 7e-13 >seq74 Length=1148980 Score = 342 bits (378), Expect = 7e-89 Identities = 570/824 (69%), Gaps = 0/824 (0%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||| ||||| ||||| | || ||||| || || |||||||||||||| Sbjct 490665 TCACCGGTGAGGATAGCGGCCTGGACAGCAGCACCGTAGGCAACGGCCTCATCGGGGTTG 490724 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || |||| || ||||| || || ||||| | | || || | || ||| Sbjct 490725 ATGGACTTGTTAGGTTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 490784 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| || Sbjct 490785 ATACGAGTGGACCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 490844 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| |||||||||||| |||| ||| Sbjct 490845 TCGCGGAGAACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 490904 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| ||||| || ||||| || | || ||| | | ||| || || Sbjct 490905 TCGAAGCGGGCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 490964 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | || ||||| || ||||| || || || || Sbjct 490965 TCGATGGTGGTCTGGGCGGCCGAAGAAAGGGTGCGCTTGGCACGCTCGCAGGCAGTGCGG 491024 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 491025 AGACGACGGAGAGCACGGGCGTTCGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 491084 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | |||| |||||||| ||||| |||||||| || || || Sbjct 491085 GCGACGAAGTGGGTGACAAGTCGGTTGTCGAAATCCTCACCTCCCAAGTGGGTGTCACCG 491144 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | || ||| | || | || ||||| ||||| Sbjct 491145 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTCAAAAGGGACACATCGAACGTT 491204 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| || | | || || ||||| ||| Sbjct 491205 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCGACCGTCTTTTTGTCGAGGCCG 491264 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||| ||||| || ||| || || | || Sbjct 491265 TAAGCGATGGCGGCAGCGGTAGGCTCGTTAATGATACGGAGGACGTTGAGACCCGAGATG 491324 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| || || |||||||| ||||| || ||| Sbjct 491325 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCATTGAAGTAGGCGGGGACGGTGACG 491384 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | || || | ||||| || | || ||| | || ||||| ||| || Sbjct 491385 ACGGCGTTGGAAACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 491444 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 | ||| || || || || || | | ||||| || || || || Sbjct 491445 ATCATGGAAGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCC 491488 >seq83 Length=1596178 Score = 159 bits (176), Expect = 4e-34 Identities = 232/327 (71%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 193659 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCTGCGGTGGCCAAGACCTCAAAGACACCG 193600 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| ||||| || || || || ||| ||| || | | Sbjct 193599 TCCTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCAAGATCATAAACGATGATG 193540 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||| ||||| ||||| || || || || || ||| Sbjct 193539 TTGCGCTCGCCACC---GGTCTTGTCGAGGCCGTAGGCGATTGCGGCGGCGGTGGGCTCA 193483 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | ||||||| ||| || || || || || | || || || |||||||||||| Sbjct 193482 TTGACGACACGAAGAACGTTGAGACCGGCGATCGTGCCGGCGTCCTTGGTCGCTTGTCGT 193423 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 193422 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGAGTGACCTTCTTGCCCAAG 193363 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 193362 TAGGTCTCGGCGGTCTCCTTCATCTTG 193336 >seq107 Length=2788206 Score = 152 bits (168), Expect = 7e-32 Identities = 323/478 (68%), Gaps = 13/478 (3%) Strand=Plus/Plus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| ||||| | ||| | |||||| || |||||||||| |||| Sbjct 1921986 GTGCGCTTGGCACGCTCGCACGCGGATCGGAGACGACGGAGAGCACGCGGGTCCTCGGAG 1922045 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTC-TCGAAT 7457 || || ||| | || | | ||||| | |||||| || ||| | | | | | Sbjct 1922046 ATGTCGAGCTTGTTCTTCCTCTCGAACTCCTTCTTGAAGTGCTCCAAGAGGGCGTTG--T 1922103 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | || || || ||||||||||| ||||| || ||||| || ||||| | |||| ||| | Sbjct 1922104 CAAAGTCCTCGCCACCCAAGTGGGTATCACCGGCGGTGGCCTTGACGGCGAAGACACCAC 1922163 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | ||| | || | ||| ||||| || || || || || || ||||| ||||| ||| Sbjct 1922164 CCGAGATGGTCAAGAGCGAGACATCGAAAGTTCCTCCTCCAAGATCAAAGATGAGAACGA 1922223 Query 7578 TCGTATC-------GTCGTCT--TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCG 7628 | | || | | ||| || || | |||| ||||| ||||| || || || | Sbjct 1922224 GCTTCTCCTTCTTGGACTTCTCGGTGGCCTCACCGAGGCCGTAGGCGATGGCAGCGGCGG 1922283 Query 7629 TTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 | || || || || ||||| || || || || || || ||| | || || || |||| Sbjct 1922284 TGGGCTCGTTGATGATACGGAGCACGTCCAAACCGGCGATCGTTCCGGCGTCCTTGGTCG 1922343 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || ||||| ||||| ||||| || ||||| || ||||| || | | |||| | | Sbjct 1922344 AGAGACGCTGCGAGTCGTTGAAGTAAGCGGGGACAGTAACGACGGCCTTCTTGACCTCTT 1922403 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 | ||||| | | || ||| | || || | |||| || ||||| || || ||||| Sbjct 1922404 TGCCGAGTTTGGTCTCAGCGGTCTCCTTGAGCTTGGAGAGGACCATGGACGAGATCTC 1922461 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 1922721 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 1922777 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 1922778 GGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1922837 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 1922838 GCAGGAGTAGGTGGTTCCAAGATCGATACCTAT 1922870 >seq109 Length=321174 Score = 113 bits (124), Expect = 6e-20 Identities = 224/328 (68%), Gaps = 8/328 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | || || | ||| ||||| ||||| || |||| ||| Sbjct 217311 TCAAAGTCCTCACCACCGAGATGGGTGTTCCCGTTGGTCGACTTGACCTCGAAGACACCC 217370 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | | ||| ||||| ||||| || || || || || | | | || Sbjct 217371 TTTTGCATCTCGAGGATCGAGACATCGAACGTTCCTCCTCCAAGATCGTAGACGG---CG 217427 Query 7577 TTCGTATCGTC-GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | |||| ||| ||| | ||||||||||||||| || || || || || || Sbjct 217428 ATC-TGTCGTGAGTCGTTGCGGT---CGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTC 217483 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || | ||| || || || |||||||| || | || || || ||||| ||||| Sbjct 217484 GTTGATGACACGGAGCACGTCAAGACCAGCAATCGTACCGGCGTCCTTGGTCGCCTGTCG 217543 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| |||||||| ||||| || ||||| |||| | |||| ||| ||||| Sbjct 217544 CTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAG 217603 Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783 || || ||| | || ||||| ||| Sbjct 217604 GTAGCCCTCGGCGGTCTCCTTCATCTTG 217631 >seq197 Length=690576 Score = 105 bits (116), Expect = 8e-18 Identities = 257/387 (66%), Gaps = 2/387 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || || || || || || ||| | ||||| || || || || || ||| || Sbjct 72556 TTCTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAG 72615 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGG-C 22562 | || || || ||||| ||||| || || || || || || ||| | | ||| | Sbjct 72616 ACGACGCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTGGATC 72675 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 | || || || | || || |||| |||| || ||||| ||||| |||||||||| Sbjct 72676 GTCAAG-AACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAACCA 72734 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || ||| | || ||| | |||||| || | ||||| | | | |||||| | Sbjct 72735 CGAGTCCCCGCGTCGTGGTCGCACCTTCGTCACGAGGAAAATCTCGCGAGCTGTCGCCGA 72794 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 ||| ||| |||| | || | ||||| || ||| | || || || || || || Sbjct 72795 GATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGTGACTG 72854 Query 22743 GGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGA 22802 ||| || |||||||| |||||| | ||||||||| || | || ||||| | || || Sbjct 72855 GGGACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACCCCCGA 72914 Query 22803 AGATTTTGTTATTGCAACAGGCGTAAC 22829 || ||||| | || || |||| ||| Sbjct 72915 CGACTTTGTCCTCGCGACGGGCGAAAC 72941 >seq79 Length=1382791 Score = 89.7 bits (98), Expect = 7e-13 Identities = 232/352 (66%), Gaps = 4/352 (1%) Strand=Plus/Plus Query 184031 TAATGAATCATGTTAAGAATAAGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTC 184090 |||| || | ||| | || || |||||||| || |||||||| |||| ||||| | Sbjct 733133 TAATCAAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCC 733192 Query 184091 ATGATCATGAGTCTTCCGTATCTGAGTTCGGAGAGTGATGTATACACTTTCCCTTGCTGA 184150 ||||||||||| | ||||| | ||| | || || || ||||| || ||||| Sbjct 733193 ATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGC 733252 Query 184151 AGCCCCAAAATCTTTTTAAGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTC 184210 || ||||| |||| || | | | || ||| || ||| ||| ||| | | Sbjct 733253 AGACCCAAGATCTGCTTGATCGCTTGAATCTCGGCATTGTCGAGAAGGGCTTTGCCCGCC 733312 Query 184211 GCGTCACGCACGTTCTTACATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCA 184270 || ||||| ||||| | || || | | || || ||||| || | || ||||| Sbjct 733313 GCTTCACGTACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCG 733372 Query 184271 ACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGA 184330 || || | ||||| | | ||||| | || || ||||| |||||||| | || || Sbjct 733373 ACGACAGCCAGACCCGAGACGGCAAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGC 733432 Query 184331 GTACACTT--ACCAGAGTGTGTGGTACCGGCTTTATTGGCATCGTCGAGTTT 184380 || ||||| ||| || | ||||| || ||||| ||||| ||||| || Sbjct 733433 GTGCACTTGGACC--CGTTCCTCGTACCAGCGTTATTCGCATCTTCGAGCTT 733482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131013689000