Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq119 107 2e-18 seq79 91.5 2e-13 >seq119 Length=1057158 Score = 107 bits (118), Expect = 2e-18 Identities = 424/658 (64%), Gaps = 8/658 (1%) Strand=Plus/Minus Query 110375 CCAAG-TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTA 110433 ||||| ||||| || || ||||| ||| || ||||| ||||||||| | ||| | Sbjct 673058 CCAAGGTTCTTTTGGTTAGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAACGGGTTG 672999 Query 110434 CCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGC 110492 || ||||| ||| | | |||||| || | ||| | | | ||| |||||| || Sbjct 672998 CCGGTTTCGACCTGGGCTTGGAGAATCGCGTACCAAAGCTTTTGCG-CGGGGATCGTCCT 672940 Query 110493 GTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACAC 110552 || ||| |||| |||| ||||| || | ||| | | || || | | || || Sbjct 672939 CTTGGCGCGACCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCGTCATAGAC 672880 Query 110553 ATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAAC 110612 || || || || | | | || |||||||| | ||| | || | |||| || Sbjct 672879 TTCGTGGAGGCCGGGGGCTTCGGCAGGGCAGAAGAGAGGCCACTCACCGGCGGCCTCGAC 672820 Query 110613 CCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTC 110672 | || ||| || || || || ||||| | ||| |||| || ||||| || | || Sbjct 672819 ACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTC 672760 Query 110673 TTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTC 110732 || | || ||||| ||| || |||| || || | ||| || | |||||| || || Sbjct 672759 CTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGATGTCAGCGTGCCACGGCTC 672700 Query 110733 GAGATAGACAGCGATGGATCCCTTACGACGAC--CCGCCT-GGTTAACATAGCGTGCTGT 110789 ||| |||| |||| || ||| ||| || ||| ||| || ||||| || || Sbjct 672699 GAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGT 672640 Query 110790 GGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT 110849 | ||| |||| | |||||| |||| || || | || | || || ||||| || Sbjct 672639 GTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGAGTAGCCGTTCGTACCGGCGAT 672580 Query 110850 TCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACT 110909 ||| | | || || |||| ||| || || ||| |||||||| || ||| Sbjct 672579 GTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACCGATACCACCGGCGGTCTTGGA 672520 Query 110910 AATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGG 110968 ||| | || || ||| |||| || | || || || ||||||||||| |||| | | Sbjct 672519 AATGAGCGCGCAAGTCT-TGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCG 672461 Query 110969 CAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 | || || || || || | ||| || |||||||||| || || ||||| || || Sbjct 672460 TGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTAAAGAGCGTCGG 672403 >seq79 Length=1382791 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 119364 GAATTCATACCTATGAGATTACACGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTC 119422 ||||||||||| || || |||||| ||||| ||| | ||| | ||| ||||| || Sbjct 944601 GAATTCATACCAATCAGCGC-CACGGGCAGAGCCTCGGTCAAGAACTCCTTTTCGATATC 944543 Query 119423 CACAGCTTCTTTCACGATGGAGTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTT 119482 || || || ||||| || ||| | | || |||| | || |||| | | Sbjct 944542 GACCGCCTCCTTCACAATCTGGTGCACCAATCCTTGACCTGGTCTCTTGTTCAAATGGCT 944483 Query 119483 AAACAACTCTACGGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACT 119542 ||||| ||||| ||||| |||||| ||||| || || || |||||||| || Sbjct 944482 GAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGAAATGAGCTCGTTGGA 944423 Query 119543 GAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGG 119589 ||| | || ||||||||||| |||| ||| || ||||||||||||| Sbjct 944422 GAAAGAGAGGCCAGGCATGAGCCCTCGTTTTTTGAGCCAAAAGATGG 944376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974343505000