Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq119 107 2e-18
seq79 91.5 2e-13
>seq119
Length=1057158
Score = 107 bits (118), Expect = 2e-18
Identities = 424/658 (64%), Gaps = 8/658 (1%)
Strand=Plus/Minus
Query 110375 CCAAG-TTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTA 110433
||||| ||||| || || ||||| ||| || ||||| ||||||||| | ||| |
Sbjct 673058 CCAAGGTTCTTTTGGTTAGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAACGGGTTG 672999
Query 110434 CCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGC 110492
|| ||||| ||| | | |||||| || | ||| | | | ||| |||||| ||
Sbjct 672998 CCGGTTTCGACCTGGGCTTGGAGAATCGCGTACCAAAGCTTTTGCG-CGGGGATCGTCCT 672940
Query 110493 GTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACAC 110552
|| ||| |||| |||| ||||| || | ||| | | || || | | || ||
Sbjct 672939 CTTGGCGCGACCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCGTCATAGAC 672880
Query 110553 ATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAAC 110612
|| || || || | | | || |||||||| | ||| | || | |||| ||
Sbjct 672879 TTCGTGGAGGCCGGGGGCTTCGGCAGGGCAGAAGAGAGGCCACTCACCGGCGGCCTCGAC 672820
Query 110613 CCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTC 110672
| || ||| || || || || ||||| | ||| |||| || ||||| || | ||
Sbjct 672819 ACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTC 672760
Query 110673 TTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTC 110732
|| | || ||||| ||| || |||| || || | ||| || | |||||| || ||
Sbjct 672759 CTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGATGTCAGCGTGCCACGGCTC 672700
Query 110733 GAGATAGACAGCGATGGATCCCTTACGACGAC--CCGCCT-GGTTAACATAGCGTGCTGT 110789
||| |||| |||| || ||| ||| || ||| ||| || ||||| || ||
Sbjct 672699 GAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGT 672640
Query 110790 GGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT 110849
| ||| |||| | |||||| |||| || || | || | || || ||||| ||
Sbjct 672639 GTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGAGTAGCCGTTCGTACCGGCGAT 672580
Query 110850 TCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACT 110909
||| | | || || |||| ||| || || ||| |||||||| || |||
Sbjct 672579 GTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACCGATACCACCGGCGGTCTTGGA 672520
Query 110910 AATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGG 110968
||| | || || ||| |||| || | || || || ||||||||||| |||| | |
Sbjct 672519 AATGAGCGCGCAAGTCT-TGAGCGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCG 672461
Query 110969 CAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026
| || || || || || | ||| || |||||||||| || || ||||| || ||
Sbjct 672460 TGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTAAAGAGCGTCGG 672403
>seq79
Length=1382791
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 119364 GAATTCATACCTATGAGATTACACGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTC 119422
||||||||||| || || |||||| ||||| ||| | ||| | ||| ||||| ||
Sbjct 944601 GAATTCATACCAATCAGCGC-CACGGGCAGAGCCTCGGTCAAGAACTCCTTTTCGATATC 944543
Query 119423 CACAGCTTCTTTCACGATGGAGTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTT 119482
|| || || ||||| || ||| | | || |||| | || |||| | |
Sbjct 944542 GACCGCCTCCTTCACAATCTGGTGCACCAATCCTTGACCTGGTCTCTTGTTCAAATGGCT 944483
Query 119483 AAACAACTCTACGGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACT 119542
||||| ||||| ||||| |||||| ||||| || || || |||||||| ||
Sbjct 944482 GAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGAAATGAGCTCGTTGGA 944423
Query 119543 GAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGG 119589
||| | || ||||||||||| |||| ||| || |||||||||||||
Sbjct 944422 GAAAGAGAGGCCAGGCATGAGCCCTCGTTTTTTGAGCCAAAAGATGG 944376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974343505000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |