Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq119 159 4e-34
seq197 116 4e-21
seq143 107 2e-18
seq79 93.3 5e-14
>seq119
Length=1057158
Score = 159 bits (176), Expect = 4e-34
Identities = 602/938 (64%), Gaps = 21/938 (2%)
Strand=Plus/Minus
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522
||||| || ||||||||||| || || |||||| | | |||||| | || ||
Sbjct 673145 GCGATCGAGGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCG 673086
Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582
|| |||| ||| || ||| ||||| || | |||||||||||| || |||||
Sbjct 673085 GTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTAGATTTCTTGTTTGCG 673026
Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642
|| ||||||||||||||| | || | || || || ||| | | |||||| || | |
Sbjct 673025 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTGGAGAATCGCGTAC 672966
Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701
|| | | | || || || | | ||||| || |||||| ||||| || | |
Sbjct 672965 CAAAGCTTTTGC-GCGGGGATCGTCCTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 672907
Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761
||||| ||||| || | | ||| ||| || || || | | | || |||||
Sbjct 672906 CAGGGCGCGGAACTCTTCGTCATAGACTTCGTGGAGGCCGGGGGCTTCGGCAGGGCAGAA 672847
Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821
|||| ||| | ||| | |||| || |||| ||| || || || || ||||| || |
Sbjct 672846 GAGAGGCCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGC 672787
Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881
| |||||||| | | || | || || | || ||||| || | || |||||
Sbjct 672786 AAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 672727
Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 106939
||| | ||| || |||||||| ||||| || |||| |||| | ||| |||||
Sbjct 672726 CTCGAAGATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 672670
Query 106940 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995
||| |||| | || |||||||| ||| ||| | || || ||||| |||| ||
Sbjct 672669 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGAT 672610
Query 106996 ACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGG 107053
|| | || | || || || || ||| || ||| | | || | | | ||
Sbjct 672609 GCCGTTCGAGTAGCCGTTCGTACCGGCGATGTAGGAG--CCAGTCGCGCGGATGTTGTGA 672552
Query 107054 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 107113
||| || || ||||| || || ||| || || |||| || | | || || |
Sbjct 672551 ATGCTCAAACCGATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCG 672492
Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173
||||| || | || || || ||||| | | || ||||| || || | ||||||
Sbjct 672491 TAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGG 672432
Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 107233
|| || || || || ||||| || || | ||||| | || | | ||||||
Sbjct 672431 TGAGGCGTTCCGGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATG 672372
Query 107234 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGC 107293
|| ||| | ||||||||| || ||||| | ||||||||||||||||| ||||||
Sbjct 672371 AGGTTGTACGACTCCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGATGGCGACACGC 672312
Query 107294 ATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTC 107353
|| | ||||| || || ||| || |||| |||| || | | ||| |
Sbjct 672311 ATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGC 672252
Query 107354 TCAAGGGTTTTGAGACCAAA------GTAACCAAAATC 107385
|| || ||||||| ||||| ||||||||||||
Sbjct 672251 TCGAGCGTTTTGAAGCCAAAGTAGTTGTAACCAAAATC 672214
>seq197
Length=690576
Score = 116 bits (128), Expect = 4e-21
Identities = 266/395 (67%), Gaps = 4/395 (1%)
Strand=Plus/Plus
Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958
|||| |||| |||||||| |||| ||| ||| || ||||| ||| | || |||
Sbjct 72552 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAATC 72611
Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018
|||| ||| ||||||||||| || ||| ||||| || | ||| | || ||
Sbjct 72612 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGCGTTGCCAAGTTGTACGCCTTCTG 72671
Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078
| ||||||| || ||||||||||| |||| ||| |||||| ||| ||| | |||||
Sbjct 72672 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCTTGTTCAA 72731
Query 7079 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT-TACCGAGGGTATC 7136
||| || || ||| | || ||| ||| ||| ||||| | ||| || | ||| | | ||
Sbjct 72732 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAAATCTCGCGA-GCTGTC 72789
Query 7137 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 7196
| ||| | ||| || |||| | | | | | || ||| | | || || |
Sbjct 72790 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACTTGGAGGCCAAGCGT 72849
Query 7197 GATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAA 7256
|| ||||| ||||| ||||| || || | |||||| | ||||| || |||||
Sbjct 72850 GACTGGGGACACGCACGCGACTACGTGGAGGGTATGTGGATGATGCTGCAGCAAGACACC 72909
Query 7257 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 7291
||||||| | ||| | || ||||| || |||||
Sbjct 72910 CCCGACGACTTTGTCCTCGCGACGGGCGAAACCCA 72944
>seq143
Length=1035691
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958
|||| |||| || ||||| |||| ||| ||| || ||||| ||| | || ||
Sbjct 314710 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 314651
Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018
|||| ||| ||||||||||| |||||| |||||||||| | || | || ||
Sbjct 314650 CGAGACGACTCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAATTGTACGCCTTCTG 314591
Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078
| ||||||| || ||||||||||| |||| ||| |||||| ||| |||||||||||
Sbjct 314590 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 314531
Query 7079 CCATGAATCACC 7090
||| || || ||
Sbjct 314530 CCACGAGTCCCC 314519
>seq79
Length=1382791
Score = 93.3 bits (102), Expect = 5e-14
Identities = 202/296 (68%), Gaps = 10/296 (3%)
Strand=Plus/Plus
Query 169178 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 169237
||| |||||||||||||| || ||||| | ||| ||| | ||| ||||| || ||
Sbjct 733150 GATCAGACCCTTGATGTGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCC 733209
Query 169238 ATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCTTCTT 169297
|| || || || || ||| |||| || || || ||||||||||||| |||
Sbjct 733210 GTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTT 733269
Query 169298 GAGATCG-TTGAACTCTTGG-TTTGATGTGA---GCTGTGCCACTGAAGCGTCGCGGACA 169352
||||| ||||| ||| || ||| | || ||| ||| | | || || || ||
Sbjct 733270 --GATCGCTTGAA-TCTCGGCATTGTCGAGAAGGGCTTTGC--CCGCCGCTTCACGTACG 733324
Query 169353 TTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGA 169412
|| |||| || || | ||| ||||| ||||||| || || || ||||| | |||
Sbjct 733325 TTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCCAGA 733384
Query 169413 CCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTT 169468
|||| ||| ||||| | || || ||||| || || || | ||||| || |||||
Sbjct 733385 CCCGAGACGGCAAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTT 733440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979140679000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |