Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq77 100 2e-16 seq90 95.1 8e-15 >seq77 Length=440787 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||| | | | | || |||| || Sbjct 313148 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 313089 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || |||||||||||| | || | || |||||||| Sbjct 313088 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGG 313029 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| ||||| || Sbjct 313028 ATCTTGGCCTTGACGTTGTCGATCGTATCGGACGACTCGACCTCGAGGGTGATGGTCTTG 312969 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCA 34980 |||||||| ||||| |||||||| |||| Sbjct 312968 CCCGTGAGGGTCTTGACAAAGATTTGCA 312941 >seq90 Length=1083821 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||| | | | | || |||| || Sbjct 178218 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 178159 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| |||||||| || || || |||||||||||| |||| | || |||||||| Sbjct 178158 AGCTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 178099 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | |||| || | ||| || |||| ||| || || || Sbjct 178098 ATCTTGGTTTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 178039 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGC 34979 ||||| || ||||| || ||||| ||| Sbjct 178038 CCCGTAAGTGTCTTGACGAAGATTTGC 178012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632709793800