Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq91 107 2e-18 >seq91 Length=2005964 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 618756 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 618697 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || ||| Sbjct 618696 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 618637 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | || || || | ||| || || || |||| ||| ||| Sbjct 618636 ATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTTG 618577 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| || ||||| Sbjct 618576 CCGGTCAAGGTCTTGACAAAGATTTGCAT 618548 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 619440 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 619381 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || ||| Sbjct 619380 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 619321 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | || || || | ||| || || || |||| ||| ||| Sbjct 619320 ATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGGGTGATCGTCTTG 619261 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| || ||||| Sbjct 619260 CCGGTCAAGGTCTTGACAAAGATTTGCAT 619232 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 619896 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 619837 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || ||| Sbjct 619836 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 619777 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | || || || | ||| || || || |||| ||| ||| Sbjct 619776 ATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTTG 619717 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| || ||||| Sbjct 619716 CCGGTCAAGGTCTTGACAAAGATTTGCAT 619688 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 620124 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 620065 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || ||| Sbjct 620064 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 620005 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | || || || | ||| || || || |||| ||| ||| Sbjct 620004 ATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTTG 619945 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| || ||||| Sbjct 619944 CCGGTCAAGGTCTTGACAAAGATTTGCAT 619916 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 620580 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 620521 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || ||| Sbjct 620520 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 620461 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | || || || | ||| || || || |||| ||| ||| Sbjct 620460 ATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTGATCGTCTTG 620401 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| || ||||| Sbjct 620400 CCGGTCAAGGTCTTGACAAAGATTTGCAT 620372 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 618528 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 618469 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || || Sbjct 618468 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 618409 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | ||| || || || || | ||| ||| Sbjct 618408 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTG 618349 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| || ||||| Sbjct 618348 CCGGTCAAGGTCTTGACAAAGATTTGCAT 618320 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 619212 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 619153 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || ||| Sbjct 619152 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 619093 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || || | || | || || || | ||| || || || || | ||| ||| Sbjct 619092 ATTTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGCGTAATCGTCTTG 619033 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || ||||| || ||||| Sbjct 619032 CCGGTCAGGGTCTTGACAAAGATTTGCAT 619004 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 618300 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 618241 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || || Sbjct 618240 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 618181 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | ||| || || || || | ||| ||| Sbjct 618180 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTG 618121 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || ||||| || ||||| Sbjct 618120 CCGGTCAGGGTCTTGACAAAAATTTGCAT 618092 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 618984 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 618925 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || || Sbjct 618924 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 618865 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | ||| || || || || | ||| ||| Sbjct 618864 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTG 618805 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || ||||| || ||||| Sbjct 618804 CCGGTCAGGGTCTTGACAAAGATTTGCAT 618776 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 619668 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 619609 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || || Sbjct 619608 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 619549 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | ||| || || || || | ||| ||| Sbjct 619548 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTG 619489 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || ||||| || ||||| Sbjct 619488 CCGGTCAGGGTCTTGACAAAGATTTGCAT 619460 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 620352 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 620293 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| |||||||| || || || || Sbjct 620292 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 620233 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| || | ||| || || || || | ||| ||| Sbjct 620232 ATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTAATCGTCTTG 620173 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || ||||| || ||||| Sbjct 620172 CCGGTCAGGGTCTTGACAAAGATTTGCAT 620144 Score = 98.7 bits (108), Expect = 8e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || || || || ||||||||||||| || | | | || || Sbjct 882458 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCGTCCTCA 882399 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||| ||||| || ||||| || || || || || |||||| Sbjct 882398 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGG-GGGATACCCTCCTTGTCTTGA 882340 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | ||||| |||| || || || || |||| ||| ||| Sbjct 882339 ATCTTGGTCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTG 882280 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| |||||||| Sbjct 882279 CCCGTAAGCGTCTTGACAAAGATCTGCAT 882251 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301 ||| |||| | ||| | || || || || || || || || || || ||||||||||| Sbjct 620827 TCCCCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 620768 Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361 || || | | | || || | ||||| || || || ||||| ||||| || ||||| || Sbjct 620767 GAGCGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGG 620708 Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 |||||| || || || || || || || || | || | ||||| || | ||| || Sbjct 620707 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGAC 620648 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | ||| |||||||| | || || || || || ||||| Sbjct 620647 CTCGAGCGTAATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 620600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277313330325