Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq91 98.7 8e-16
>seq91
Length=2005964
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 618309 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 618250
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 618249 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 618190
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | ||||| | || ||||| | ||||
Sbjct 618189 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTA 618130
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
||||| || || |||| || || |||||||| ||||||
Sbjct 618129 ATCGTCTTGCCGGTCAGGGTCTTGACAAAAATTTGCATC 618091
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 618537 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 618478
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 618477 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 618418
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | ||||| | || ||||| | ||||
Sbjct 618417 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTA 618358
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || ||||| || || ||||| || |||||
Sbjct 618357 ATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 618320
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 618993 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 618934
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 618933 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 618874
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | ||||| | || ||||| | ||||
Sbjct 618873 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTA 618814
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || |||| || || ||||| || |||||
Sbjct 618813 ATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 618776
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 619677 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 619618
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 619617 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 619558
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | ||||| | || ||||| | ||||
Sbjct 619557 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTA 619498
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || |||| || || ||||| || |||||
Sbjct 619497 ATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 619460
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 620361 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 620302
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 620301 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 620242
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | ||||| | || ||||| | ||||
Sbjct 620241 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTA 620182
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || |||| || || ||||| || |||||
Sbjct 620181 ATCGTCTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 620144
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 618765 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 618706
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 618705 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 618646
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | || || | || ||||| | ||
Sbjct 618645 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTG 618586
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || ||||| || || ||||| || |||||
Sbjct 618585 ATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 618548
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 619449 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 619390
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 619389 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 619330
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | || || | || ||||| | ||
Sbjct 619329 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGGGTG 619270
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || ||||| || || ||||| || |||||
Sbjct 619269 ATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619232
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 619905 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 619846
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 619845 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 619786
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | || || | || ||||| | ||
Sbjct 619785 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTG 619726
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || ||||| || || ||||| || |||||
Sbjct 619725 ATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619688
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 620133 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 620074
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 620073 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 620014
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | || || | || ||||| | ||
Sbjct 620013 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTG 619954
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || ||||| || || ||||| || |||||
Sbjct 619953 ATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 619916
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 620589 AGGCGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 620530
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 620529 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 620470
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | || || | || ||||| | ||
Sbjct 620469 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCCGAGGATTCGACCTCGAGTGTG 620410
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || ||||| || || ||||| || |||||
Sbjct 620409 ATCGTCTTGCCGGTCAAGGTCTTGACAAAGATTTGCAT 620372
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 620817 AGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGG 620758
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 620757 CCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCC 620698
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | ||||| | || ||||| | ||||
Sbjct 620697 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGATTCGACCTCGAGCGTA 620638
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || |||| || || || || || |||||
Sbjct 620637 ATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 620600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936555397675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |