Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq119 233 4e-56 seq79 102 2e-16 seq143 98.7 2e-15 >seq119 Length=1057158 Score = 233 bits (258), Expect = 4e-56 Identities = 790/1221 (65%), Gaps = 51/1221 (4%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479 || ||||||||||||||||| ||||| ||||||||| |||| |||||||| ||| Sbjct 673409 GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAG---CTTGCGCGCCTCGGGCGAA 673353 Query 221480 GTGAAGGGCATACGC--AGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 ||| ||||| ||| || |||| | ||||||| || || || |||||||| |||| Sbjct 673352 TCGAACGGCAT-CGCCAAGGCCATGAACG-CGTCGGCAAGACCTTGCACTCCGATGCCGA 673295 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||| | ||| | ||| ||| || || |||||||| |||| |||| || Sbjct 673294 TGGGGCGGTGGCGGAGGTTAGAATTCTGTGCCTCGATGACGGGATAGTAGTTAACGTTGA 673235 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657 | | ||| | ||| | || || ||| || | |||||| || ||||| | || | Sbjct 673234 TGATGCGGTTCAAGTTGAAAGCGACGACCTTGGCGACCTCGTGCAACTTCTTGAAATCGT 673175 Query 221658 ACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT----- 221712 |||| ||||| | || | |||| |||||||| Sbjct 673174 ACAC---------GCCGTTCTTGATG----------AAGCTC----GGCAACGCGATCGA 673138 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 ||||| || || ||||| ||| || | |||| |||||||| || || || Sbjct 673137 GGCCAAATTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCAATGATCTCGGTGCACAG 673078 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 ||| | ||||||| || || |||| || || ||||| || || || |||||||| Sbjct 673077 GTTCGAGGACTTGATCGTGCCAAGGTTCTTTTGGTTAGATTTCTTGTTTGCGGCGTCCTT 673018 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||||||||| || || ||| || || | ||| || |||||| || ||| || | Sbjct 673017 GTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTGGAGAATCGCGTACCAAAGCTT 672958 Query 221893 TCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC--CCGGTATAGAGC 221950 | ||| | |||||||||| | |||||| |||||| || | | | || || Sbjct 672957 TTGCGCGGGGATCGTCCTCTTGGCGCGACCCTC---CTTTTCGTATTTCTCGAACAGGGC 672901 Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010 | |||| ||| | || | |||| ||||| || ||| || || | ||| Sbjct 672900 GCGG--AACTCTTCGTCATAGACTTCGTGGAGGCCGGGGGCTTCGGCAGGGCAGAAGAGA 672843 Query 222011 CTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGA 222070 ||| | | | | | ||| | || ||| ||||| || |||||||| ||||| Sbjct 672842 GGCCACTCACCGGCGGCCTCGACACGCTCCATAAAGAGATCGGGGATCCAGAGCGCAAAG 672783 Query 222071 AAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130 |||||||| | | || |||||| ||||| ||| || | || |||| ||||| Sbjct 672782 AAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCG 672723 Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190 || |||||||||||||||||||| || |||| || | || ||||| |||||||||||| Sbjct 672722 AAGATGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCA 672663 Query 222191 CCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 || || || || | | | |||| ||| || || | || || | ||||| Sbjct 672662 CCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTC 672603 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGA-CAT 222309 || ||||| || || ||||| | || || | | ||| || | || Sbjct 672602 GAGTAGCCGTTCGTACCGGCGATGTAGGAGCCAGTCGCGCGGATGTTG-TGAATGCTCAA 672544 Query 222310 GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369 ||||||||||||||| || || || | ||||| ||||||| ||||| |||||| Sbjct 672543 ACCGATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCC 672484 Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA 222429 || || || || ||||| | | | ||| ||||| ||||| | ||| | | | | Sbjct 672483 TTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGT 672424 Query 222430 ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTA 222489 | ||||||||| ||||| || |||||| |||||||||| | ||||| || | ||| Sbjct 672423 TCCGGCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTA 672364 Query 222490 CGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACAT 222549 || ||| | ||| | |||||| || ||||| || |||||| | |||| ||| Sbjct 672363 CGACTCCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGATGGCGACACGCATGAGCAT 672304 Query 222550 GTACTGGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGA 222607 || ||| || | || | |||| | | | || |||| ||| || || || Sbjct 672303 GTGCTGCGGGCGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGC 672246 Query 222608 GTCTTGAACCCAAAGTAGTTG 222628 || ||||| |||||||||||| Sbjct 672245 GTTTTGAAGCCAAAGTAGTTG 672225 >seq79 Length=1382791 Score = 102 bits (112), Expect = 2e-16 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||| |||||||| | |||||| || ||| ||||||||||||| ||||| Sbjct 943662 ATTTGGGCCATGTACAAACAAGCTCAAGCGTCGTTTTGGTCCGCCGAAGAGATCGATCTC 943721 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | ||| ||| | ||| |||| || |||| | ||| ||||| | | ||| | Sbjct 943722 GGCAACGACCTCCACGACTGGCACCACAAGCTCAA--CAACGACGAACGCTACTTTATTG 943779 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||||| | || ||||| || || || ||||| | ||||||||||||||| ||||| Sbjct 943780 CCCACGTGCTCGCCTTCTTCGCCGCTTCGGATGGGGTCGTGAACGAGAATCTGGTCGAGA 943839 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | ||| | || || ||||||| || || || | ||| || || || || ||||| Sbjct 943840 GGTTCTCAAGTGAGGTGCAGTTCGCCGAAGCGAGGTGCTTTTATGGCTTTCAGAT 943894 >seq143 Length=1035691 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 25921 GGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT 25980 || |||||||| ||||||||||||||||| || || |||||||| || ||| Sbjct 144705 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 144764 Query 25981 TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||||||||||||||| | |||||||| ||||||| || ||||| ||||| | | | Sbjct 144765 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTTTTGTTC 144824 Query 26041 ACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCT 26100 | |||| | | | |||| | ||| |||||| |||||||| ||||| Sbjct 144825 TC---CCACCTCGAGCGAAGACCTCACCCAGATACCGTCGCGCTCATCATCAAGGAGGCC 144881 Query 26101 GTGGAGATCGAGAAGGAGTT 26120 || || ||||||||||| || Sbjct 144882 GTCGAAATCGAGAAGGAATT 144901 Score = 91.5 bits (100), Expect = 3e-13 Identities = 155/224 (69%), Gaps = 7/224 (3%) Strand=Plus/Plus Query 25488 GTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACAT 25547 |||||||||||| | || |||||||||||||||||| || || |||||||||| Sbjct 143991 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 144050 Query 25548 GGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTG 25602 | ||| |||| || |||| | || ||||||| | || || | |||| | Sbjct 144051 GCACGACTGGGACAACAAGCTCAAGCC--CGACGAGCGCTACTTCATCTCGCACGTCCTC 144108 Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662 || || || || ||||| || || || || |||||||| || |||| ||||| | | Sbjct 144109 GCCTTTTTCGCCGCCTCCGACGGGATTGTCAACGAGAACTTGGTCGAGCGATTCTCTGGT 144168 Query 25663 GAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 || || |||| || ||||| || || || |||||||| || Sbjct 144169 GAGGTCCAGTCCGCCGAGGCTCGATGCTTTTATGGTTTCCAAAT 144212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842187624000