Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq119 187 3e-42
seq143 114 2e-20
seq197 113 5e-20
>seq119
Length=1057158
Score = 187 bits (206), Expect = 3e-42
Identities = 608/938 (65%), Gaps = 21/938 (2%)
Strand=Plus/Plus
Query 75137 GATTTTGGTTAC------TTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTC 75190
|||||||||||| ||||| ||||||| || ||| ||| | | || ||
Sbjct 672214 GATTTTGGTTACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATC 672273
Query 75191 GATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCAC 75250
|| |||| || ||| ||| ||| ||||| ||||||| ||||| ||||||||||||
Sbjct 672274 GACGGCAAGGTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCATCGGCATCCAC 672333
Query 75251 GGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATT 75310
|| | ||||| || ||||||||| | ||| || |||||| | | || |
Sbjct 672334 GGTCACGACATCGAGCGCGTCTTGGAGTCGTACAACCTCATGTCCGAGCGCTACTTTACC 672393
Query 75311 CACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTC 75370
||||| | || || ||||| || || || || || |||||| | || || |||
Sbjct 672394 CACGCCTCGCCGACGCTCTTTAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTC 672453
Query 75371 CTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCG 75430
|| || | | ||||| || || || | || ||||| | || || | | || |||
Sbjct 672454 CTGGTCACGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACTTGCGCG 672513
Query 75431 CAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAA 75490
| || || ||| || || ||||| || || ||| || | | | || | |
Sbjct 672514 CTCATTTCCAAGACCGCCGGTGGTATCGGTTTGAGCATTCACAACATCCGCGCGACTGG- 672572
Query 75491 TCTCGTAT-TCGGGGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTAT 75548
||| || ||| || || || || | || | || || |||| ||||| || || |
Sbjct 672573 -CTCCTACATCGCCGGTACGAACGGCTACTCGAACGGCATCGTTCCCATGCTCCGTGTCT 672631
Query 75549 TTAACGCCACAGCGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCG 75602
||| ||| |||||||| || | |||| || ||||| | || || |||
Sbjct 672632 ACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCG 672688
Query 75603 CGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACC 75662
|| ||||| | || || ||||| || || ||| | |||||||| || | || ||||
Sbjct 672689 CGATCTACCTCGAGCCGTGGCACGCTGACATCTTCGAGTTCCTGGACCTTCGCAAGAACC 672748
Query 75663 AAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTT 75722
| || | || || | || | | |||||||| | | || ||||| || || || |
Sbjct 672749 ACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCT 672808
Query 75723 TCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAG 75782
| ||| |||| || |||| | ||| | ||| |||| ||||| || | | | || || |
Sbjct 672809 TTATGGAGCGTGTCGAGGCCGCCGGTGAGTGGCCTCTCTTCTGCCCTGCCGAAGCCCCCG 672868
Query 75783 GTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGG 75842
| ||| ||| | | || ||||| ||||| | | || || ||| ||||||
Sbjct 672869 GCCTCCACGAAGTCTATGACGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGG 672928
Query 75843 GTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAG 75901
|| | ||||| ||| | || || || | | ||||| | || |||||| || | |||
Sbjct 672929 GTCGCGCCAAGAGGACGATCCCCGC-GCAAAAGCTTTGGTACGCGATTCTCCAAGCCCAG 672987
Query 75902 ACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAA 75961
|| || || | || | ||||| |||||||| || |||||||| |||||||
Sbjct 672988 GTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCTAACCAA 673047
Query 75962 AAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGAT 76021
||||| | || || |||||| ||| || || ||||| || || | |||||| | |
Sbjct 673048 AAGAACCTTGGCACGATCAAGTCCTCGAACCTGTGCACCGAGATCATTGAGTACTCGGCG 673107
Query 76022 AAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059
|||||| || || ||||||||||| || |||||
Sbjct 673108 CCCGATGAGTGCGCCGTCTGCAATTTGGCCTCGATCGC 673145
>seq143
Length=1035691
Score = 114 bits (126), Expect = 2e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807
||||| | ||||| ||| | || || | || || ||||||||||||||||| |||
Sbjct 314486 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 314545
Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867
||| || ||||| | || || || ||||| || ||||||| |||| ||| ||||
Sbjct 314546 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAT 314605
Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927
|||| ||| || ||| || || ||||||||||| ||| ||| | || || || ||
Sbjct 314606 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGAGTCGTCTCGGACTGAGGGGTCTCG 314665
Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
||| || || ||| |||||| || ||||| |||||
Sbjct 314666 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 314703
>seq197
Length=690576
Score = 113 bits (124), Expect = 5e-20
Identities = 269/407 (66%), Gaps = 0/407 (0%)
Strand=Plus/Minus
Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618
|| ||||||| | | || | ||| || || |||||||||| ||| | || || |
Sbjct 72965 TCGACAAACTCCTTGACGGGGTGGGTTTCGCCCGTCGCGAGGACAAAGTCGTCGGGGGTG 72906
Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678
||||| || ||||| | |||||| | || || ||||| || || |||||||| |
Sbjct 72905 TCTTGCTGCAGCATCATCCACATACCCTCCACGTAGTCGCGTGCGTGTCCCCAGTCACGC 72846
Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738
|| | | ||| ||||| | ||| | || | ||| | || | |||
Sbjct 72845 TTGGCCTCCAAGTTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 72786
Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798
| | || ||| | ||||| ||| | ||| || | ||| || |||||||||||
Sbjct 72785 GCTCGCGAGATTTTCCTCGTGACGAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAAC 72726
Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858
| ||| ||| ||| || ||||| | || || || ||||| || ||||||| ||||
Sbjct 72725 AAGATACCGTTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAG 72666
Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918
||| ||| |||| ||||| || || || ||||||||||| ||| ||| | |||
Sbjct 72665 GCGTACAACTTGGCAACGCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGA 72606
Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
|| || || ||| || || ||| ||| || || |||||||||||
Sbjct 72605 GGGGTCTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTA 72559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596567922148000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |