Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq119 187 3e-42 seq143 114 2e-20 seq197 113 5e-20 >seq119 Length=1057158 Score = 187 bits (206), Expect = 3e-42 Identities = 608/938 (65%), Gaps = 21/938 (2%) Strand=Plus/Plus Query 75137 GATTTTGGTTAC------TTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTC 75190 |||||||||||| ||||| ||||||| || ||| ||| | | || || Sbjct 672214 GATTTTGGTTACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATC 672273 Query 75191 GATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCAC 75250 || |||| || ||| ||| ||| ||||| ||||||| ||||| |||||||||||| Sbjct 672274 GACGGCAAGGTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCATCGGCATCCAC 672333 Query 75251 GGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATT 75310 || | ||||| || ||||||||| | ||| || |||||| | | || | Sbjct 672334 GGTCACGACATCGAGCGCGTCTTGGAGTCGTACAACCTCATGTCCGAGCGCTACTTTACC 672393 Query 75311 CACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTC 75370 ||||| | || || ||||| || || || || || |||||| | || || ||| Sbjct 672394 CACGCCTCGCCGACGCTCTTTAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTC 672453 Query 75371 CTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCG 75430 || || | | ||||| || || || | || ||||| | || || | | || ||| Sbjct 672454 CTGGTCACGATGAAGGACGATTCGATTGAAGGCATCTACGACACGCTCAAGACTTGCGCG 672513 Query 75431 CAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAA 75490 | || || ||| || || ||||| || || ||| || | | | || | | Sbjct 672514 CTCATTTCCAAGACCGCCGGTGGTATCGGTTTGAGCATTCACAACATCCGCGCGACTGG- 672572 Query 75491 TCTCGTAT-TCGGGGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTAT 75548 ||| || ||| || || || || | || | || || |||| ||||| || || | Sbjct 672573 -CTCCTACATCGCCGGTACGAACGGCTACTCGAACGGCATCGTTCCCATGCTCCGTGTCT 672631 Query 75549 TTAACGCCACAGCGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCG 75602 ||| ||| |||||||| || | |||| || ||||| | || || ||| Sbjct 672632 ACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCG 672688 Query 75603 CGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACC 75662 || ||||| | || || ||||| || || ||| | |||||||| || | || |||| Sbjct 672689 CGATCTACCTCGAGCCGTGGCACGCTGACATCTTCGAGTTCCTGGACCTTCGCAAGAACC 672748 Query 75663 AAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTT 75722 | || | || || | || | | |||||||| | | || ||||| || || || | Sbjct 672749 ACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTCT 672808 Query 75723 TCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAG 75782 | ||| |||| || |||| | ||| | ||| |||| ||||| || | | | || || | Sbjct 672809 TTATGGAGCGTGTCGAGGCCGCCGGTGAGTGGCCTCTCTTCTGCCCTGCCGAAGCCCCCG 672868 Query 75783 GTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGG 75842 | ||| ||| | | || ||||| ||||| | | || || ||| |||||| Sbjct 672869 GCCTCCACGAAGTCTATGACGAAGAGTTCCGCGCCCTGTTCGAGAAATACGAAAAGGAGG 672928 Query 75843 GTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAG 75901 || | ||||| ||| | || || || | | ||||| | || |||||| || | ||| Sbjct 672929 GTCGCGCCAAGAGGACGATCCCCGC-GCAAAAGCTTTGGTACGCGATTCTCCAAGCCCAG 672987 Query 75902 ACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAA 75961 || || || | || | ||||| |||||||| || |||||||| ||||||| Sbjct 672988 GTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCTAACCAA 673047 Query 75962 AAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGAT 76021 ||||| | || || |||||| ||| || || ||||| || || | |||||| | | Sbjct 673048 AAGAACCTTGGCACGATCAAGTCCTCGAACCTGTGCACCGAGATCATTGAGTACTCGGCG 673107 Query 76022 AAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 |||||| || || ||||||||||| || ||||| Sbjct 673108 CCCGATGAGTGCGCCGTCTGCAATTTGGCCTCGATCGC 673145 >seq143 Length=1035691 Score = 114 bits (126), Expect = 2e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||| ||| | || || | || || ||||||||||||||||| ||| Sbjct 314486 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 314545 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| |||| Sbjct 314546 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAT 314605 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 314606 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGAGTCGTCTCGGACTGAGGGGTCTCG 314665 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 314666 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 314703 >seq197 Length=690576 Score = 113 bits (124), Expect = 5e-20 Identities = 269/407 (66%), Gaps = 0/407 (0%) Strand=Plus/Minus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 || ||||||| | | || | ||| || || |||||||||| ||| | || || | Sbjct 72965 TCGACAAACTCCTTGACGGGGTGGGTTTCGCCCGTCGCGAGGACAAAGTCGTCGGGGGTG 72906 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 ||||| || ||||| | |||||| | || || ||||| || || |||||||| | Sbjct 72905 TCTTGCTGCAGCATCATCCACATACCCTCCACGTAGTCGCGTGCGTGTCCCCAGTCACGC 72846 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 || | | ||| ||||| | ||| | || | ||| | || | ||| Sbjct 72845 TTGGCCTCCAAGTTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 72786 Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798 | | || ||| | ||||| ||| | ||| || | ||| || ||||||||||| Sbjct 72785 GCTCGCGAGATTTTCCTCGTGACGAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAAC 72726 Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858 | ||| ||| ||| || ||||| | || || || ||||| || ||||||| |||| Sbjct 72725 AAGATACCGTTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAG 72666 Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918 ||| ||| |||| ||||| || || || ||||||||||| ||| ||| | ||| Sbjct 72665 GCGTACAACTTGGCAACGCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGA 72606 Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || ||| || || ||| ||| || || ||||||||||| Sbjct 72605 GGGGTCTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTA 72559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567922148000