Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12- 23] 225 sequences; 40,892,155 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq98 87.8 5e-12 >seq98 Length=1903548 Score = 87.8 bits (96), Expect = 5e-12 Identities = 124/170 (73%), Gaps = 12/170 (7%) Strand=Plus/Plus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 ||||| || ||||| || |||||||||||||| |||||||||||||||||||| || | Sbjct 515778 CCGTGAGATATCATGCAGTCACGCTCCATTTCTCCGAAACGAAGACCACCATCTCGCGAT 515837 Query 251548 CTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGGCTA 251601 | |||||| | || || || || |||| | | | |||||| | | ||| | | Sbjct 515838 CGACCCTCCACGGGTTGTCGGGTCAAGATCTGA--AGAGGACCGCGAGCTCGAGAGTGAA 515895 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651 | ||| || || ||||| |||||||| || |||||| ||| ||||| Sbjct 515896 TTTTG----TCGTTGACCATGTGCTTGAGCCGTTGGTAGTATGTTGGACC 515941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813357025825