Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq119 221 1e-51
seq91 100 3e-15
seq83 93.3 5e-13
>seq119
Length=1057158
Score = 221 bits (244), Expect = 1e-51
Identities = 338/481 (70%), Gaps = 17/481 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||||||||| |||| ||| |||| ||||||||||| |||| |||||| ||
Sbjct 672659 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGAACGATGCCGTTCGAG 672600
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||| || || || | ||||| ||| | ||||| | ||||| | || |||
Sbjct 672599 TAGCCGTTCGTACCGGCGATGTAGGAGCCAGTCGCGCGGATGTTGTGAATGCTCAAACCG 672540
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | |||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 672539 ATACCACCGGCGGTCTTGGAAATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCTTCA 672480
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||| ||| ||||||| || || || || ||||| |||||||| | ||| |||
Sbjct 672479 ATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCG 672420
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGTG 1630365
||||| |||||||| |||| || ||| || | || |||||| || ||| |
Sbjct 672419 GCGTTAAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGAC 672360
Query 1630366 GCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGACG 1630425
| | |||||| || | |||| | || | | ||||||||||||
Sbjct 672359 TCCAAGACGCGC------------TCGATGTCGTGA---CCGTGGATGCCGATGGCGACA 672315
Query 1630426 CGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCG-CGCACCTTGGTCAGGTAGGA 1630484
||||||||||||| ||| || || ||| |||| |||| || | | || ||||||
Sbjct 672314 CGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAG-CAAGTAGGA 672256
Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGGC 1630544
|| | || ||| |||||||||| | ||||||||||||||| | |||||
Sbjct 672255 GCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAACCAAAATCGCGGTCGTAGATAATGGC 672196
Query 1630545 G 1630545
|
Sbjct 672195 G 672195
Score = 129 bits (142), Expect = 7e-24
Identities = 296/453 (65%), Gaps = 6/453 (1%)
Strand=Plus/Minus
Query 1628151 GGGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTT 1628210
||||| ||| ||| | |||||||||||||||||| | ||| | |||| || |||||
Sbjct 673110 GGGCGCCGAGTACTCAATGATCTCGGTGCACAGGTTCGAGGACTTGATCGTGCCAAGGTT 673051
Query 1628211 CTGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTC 1628270
|| ||||| | || ||| |||||||||||| ||||||| | || |||||| ||
Sbjct 673050 CTTTTGGTTAGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTC 672991
Query 1628271 GATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGC---GC 1628327
|| ||| || || || || |||| | || ||||||| || |||| | ||
Sbjct 672990 GACCTGGGCTTGGAGAATCGCGTACCAAAGCTTTTGCGCGGG---GATCGTCCTCTTGGC 672934
Query 1628328 GCGGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTG 1628387
||| |||| || | || | ||| |||||
Sbjct 672933 GCGACCCTCCTTTTCGTATTTCTCGAACAGGGCGCGGAACTCTTCGTCATAGACTTCGTG 672874
Query 1628388 CAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCG 1628447
|||||||| || |||| || || ||||| | ||| || || ||| | | | ||
Sbjct 672873 GAGGCCGGGGGCTTCGGCAGGGCAGAAGAGAGGCCACTCACCGGCGGCCTCGACACGCTC 672814
Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507
||||||||| || |||| || || | ||||| || || || ||| ||||||||
Sbjct 672813 CATAAAGAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTT 672754
Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567
|||||||||||| ||||| || | |||| ||||| |||||||||||||| |||||
Sbjct 672753 GCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGATGTCAGCGTGCCACGGCTCGAGGTA 672694
Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
| || ||||| || |||||| ||| ||
Sbjct 672693 GATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 672661
Score = 100 bits (110), Expect = 3e-15
Identities = 170/244 (70%), Gaps = 8/244 (3%)
Strand=Plus/Minus
Query 1626982 TGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCG 1627041
||||||||||| |||| ||| || || |||||| | ||||||| |||||||||||
Sbjct 674259 TGGTCGACGGTGAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCCA 674200
Query 1627042 GTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGT--GATGCGC--TCGGGCGT 1627097
||||| || || || ||| |||| |||||||||||| | ||||| ||| | |
Sbjct 674199 GTCTTCAGTCCTCGCTTCCAGCCGTAAAAGTGCATCGACGTCAGTTGCGCCATCGTGGGG 674140
Query 1627098 CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157
| || | ||| | ||| ||||| || |||||| | ||| | || |||||
Sbjct 674139 CTCGAC----AAGTGGATGTTTAGCGATTGCGACTGGTCAATGAAGGCACCTCGGTCGGC 674084
Query 1627158 CGCCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAG 1627217
| || |||||| || | | | | |||||| ||||||||| |||||||||||||
Sbjct 674083 GGACAAGTCGATAATGGTCTTTTGCGAGATCTCCCAGACGGTCTTGTAGATGGCCTTGAG 674024
Query 1627218 GTCG 1627221
|||
Sbjct 674023 ATCG 674020
>seq91
Length=2005964
Score = 100 bits (110), Expect = 3e-15
Identities = 103/132 (78%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 378354 ATCGGTGGTACGGTCACGTGCGTTATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCCGTG 378295
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || ||| | ||||||||||||||||||||||| || ||||||||
Sbjct 378294 -TTCGACAAGTTGGAAGCCCTTTTGGCCCACGCCATGCTGTCGATCCCCGCAACCAAGGG 378236
Query 19172 ATTCGAGATTGG 19183
|| ||||||||
Sbjct 378235 CTTTGAGATTGG 378224
>seq83
Length=1596178
Score = 93.3 bits (102), Expect = 5e-13
Identities = 143/203 (70%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | |||||| |||||||||| ||
Sbjct 792834 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGAATCTCGCGCGATGAGA 792893
Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
|||| ||| | |||| || ||| || | |||||| | ||| || ||||
Sbjct 792894 TCGTCGACTTGTGGTTGT---AGGTCGCGAGCTTGGATGCCTCGAGGGAGATACGTTCGA 792950
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| ||| |||||
Sbjct 792951 AGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAGATACCCGTGTCGG 793010
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
| || || ||||| | |||||||
Sbjct 793011 GATGGACTTGCTTCAACACCTTG 793033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107120735446325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |