Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq77 123 2e-23
seq90 120 3e-22
seq91 118 1e-21
>seq77
Length=440787
Score = 123 bits (136), Expect = 2e-23
Identities = 163/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764
|||| |||||| | || || || || || || || || || ||||| || || | |||
Sbjct 312941 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 313000
Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
| || | || | || || |||||||| ||||| |||||||| || || || || |
Sbjct 313001 ATACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAGC 313060
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884
||||| | ||||||||||| || ||||| |||||| | | | || | || || ||||
Sbjct 313061 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 313120
Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| |||||||| ||||| || ||||||||| | || |||| || ||
Sbjct 313121 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 313166
>seq90
Length=1083821
Score = 120 bits (132), Expect = 3e-22
Identities = 153/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765
||| ||||| | || || || || || || || || || ||||| || || | ||||
Sbjct 178012 GCAAATCTTCGTCAAGACACTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 178071
Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
||| | || |||| ||||| || |||||||||||| ||||| || || || || || |
Sbjct 178072 CACGATCGACAACGTCAAAACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 178130
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884
||||| | ||||| ||||| || ||||| |||||| | | | || | || || ||||
Sbjct 178131 AACGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 178190
Query 24885 TTCAAAAGGAATCGACACTACACTTGGT 24912
| |||||||| ||||| || ||||||||
Sbjct 178191 TCCAAAAGGAGTCGACCCTCCACTTGGT 178218
>seq91
Length=2005964
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || ||||| || || ||||||||||| || ||| || |
Sbjct 618776 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 618835
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 618836 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 618895
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || || ||||| ||||| | | | | ||||| |||
Sbjct 618896 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 618955
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| ||||| || |||||||||
Sbjct 618956 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 618985
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || ||||| || || ||||||||||| || ||| || |
Sbjct 619460 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 619519
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 619520 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 619579
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || || ||||| ||||| | | | | ||||| |||
Sbjct 619580 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 619639
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| ||||| || |||||||||
Sbjct 619640 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 619669
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || ||||| || || ||||||||||| || ||| || |
Sbjct 620144 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 620203
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 620204 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 620263
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || || ||||| ||||| | | | | ||||| |||
Sbjct 620264 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 620323
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| ||||| || |||||||||
Sbjct 620324 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 620353
Score = 114 bits (126), Expect = 1e-20
Identities = 152/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| | || || || ||||| || || ||||||||||| || ||| || |
Sbjct 618091 GATGCAAATTTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTC 618150
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 618151 AGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 618210
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||||||| || || || ||||| ||||| | | | | ||||| ||
Sbjct 618211 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 618270
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || ||||| ||||| || |||||||||
Sbjct 618271 CATCCAGAAGGAGTCGACGCTGCACTTGGTG 618301
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | ||||| || || ||||||||||| || ||| || |
Sbjct 618320 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 618379
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 618380 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 618439
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || || ||||| ||||| | | | | ||||| |||
Sbjct 618440 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 618499
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| ||||| || |||||||||
Sbjct 618500 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 618529
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || ||||| || || ||||||||||| || ||| || |
Sbjct 620600 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 620659
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 620660 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 620719
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || || ||||| ||||| | | | | ||||| |||
Sbjct 620720 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 620779
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| ||||| || |||||||||
Sbjct 620780 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 620809
Score = 111 bits (122), Expect = 1e-19
Identities = 154/212 (73%), Gaps = 3/212 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || ||||| || || || || || |||||||| || || | |
Sbjct 882250 GATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTC 882309
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || |||| || || ||||| |||||||| || || || || ||||| |
Sbjct 882310 GGACACGATTGACAACGTCAAGAC-CAAGATTCAAGACAAGGAGGGTAT-CCCCCCGACC 882367
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || || |||||||| || || || ||||| ||||| | | | | ||||| |
Sbjct 882368 AGCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACA 882427
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| || ||||| ||||| || |||||||||
Sbjct 882428 ACATCCAGAAGGAGTCGACGCTGCACTTGGTG 882459
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || ||||| || || ||||||||||| || ||| || |
Sbjct 619004 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 619063
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| || | ||| || || ||||| || || || || ||||| ||
Sbjct 619064 GATACGATCGACAACGTCAAGGCCAAA-ATTCAGGACAAGGAGGGCATTCCCCCCGACCA 619122
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||||||| || || || ||||| ||||| | | | | ||||| ||
Sbjct 619123 GCAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAA 619182
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || ||||| ||||| || |||||||||
Sbjct 619183 CATCCAGAAGGAGTCGACGCTGCACTTGGTG 619213
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || ||||| || || ||||||||||| || ||| || |
Sbjct 882478 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCG 882537
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| || || || || || || ||||| ||
Sbjct 882538 GATACGATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCAG 882597
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||| || || ||||| ||||| | | | | || || ||
Sbjct 882598 CAGCGATTGATCTTTGCGGGCAAGCAGCTCGAGGACGGTCGCACGCTCGCCGACTACAAT 882657
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| ||||| || |||||||||
Sbjct 882658 ATCCAGAAGGAGTCGACGCTCCACTTGGTG 882687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896334663000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |