Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015495.1_202016-12-
23] 225 sequences; 40,892,155 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq77 89.7 4e-13
seq91 82.4 6e-11
>seq77
Length=440787
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 107557 TGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCG 107616
||||||| |||||||| || | || ||||| ||||| ||| |||| ||| | ||
Sbjct 312941 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 313000
Query 107617 ATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGC 107676
|||| ||| | | || || ||||| || || ||||| | ||| || ||||
Sbjct 313001 ATACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAGC 313060
Query 107677 AGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACA 107736
| | || || | ||| || || ||||| ||||| | | || |||| ||||||||||
Sbjct 313061 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 313120
Query 107737 TTCAAAAGGAGTCTACGTTGCACATGGTG 107765
| ||||||||||| || | ||| |||||
Sbjct 313121 TCCAAAAGGAGTCGACCCTCCACTTGGTG 313149
>seq91
Length=2005964
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||||||||| || | || ||||| || ||||| |||| || |
Sbjct 618092 ATGCAAATTTTTGTCAAGACCCTGACCGGCAAGACGATTACGCTCGAGGTCGAATCCTCA 618151
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || ||||| || || || ||| | ||| || |||
Sbjct 618152 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 618211
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| || | || | ||||| || ||||| ||||||| | || | || || ||||||
Sbjct 618212 CAGCGATTGATCTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACGCTCGCCGATTACAAC 618271
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| ||| ||||| |||||
Sbjct 618272 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 618301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398875706205025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |